Gene info for GFF3018 in Variovorax sp. SCN45

Annotation: VgrG protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 446,843 to 448,783
See nucleotide sequence around GFF3018 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF3013 and GFF3014 are separated by 29 nucleotidesGFF3014 and GFF3015 are separated by 1 nucleotidesGFF3015 and GFF3016 overlap by 4 nucleotidesGFF3016 and GFF3017 are separated by 13 nucleotidesGFF3017 and GFF3018 are separated by 5 nucleotidesGFF3018 and GFF3019 are separated by 53 nucleotidesGFF3019 and GFF3020 are separated by 3 nucleotidesGFF3020 and GFF3021 are separated by 63 nucleotidesGFF3021 and GFF3022 overlap by 4 nucleotidesGFF3022 and GFF3023 are separated by 23 nucleotides GFF3013 - KEGG: type VI secretion system secreted protein Hcp, at 440,289 to 440,771 GFF3013 GFF3014 - KEGG: type VI secretion system protein ImpF, at 440,801 to 441,259 GFF3014 GFF3015 - T6SS component TssF (ImpG/VasA), at 441,261 to 443,072 GFF3015 GFF3016 - T6SS component TssG (ImpH/VasB), at 443,069 to 444,082 GFF3016 GFF3017 - T6SS AAA+ chaperone ClpV (TssH), at 444,096 to 446,837 GFF3017 GFF3018 - VgrG protein, at 446,843 to 448,783 GFF3018 GFF3019 - hypothetical protein, at 448,837 to 449,511 GFF3019 GFF3020 - FIG00966904: hypothetical protein, at 449,515 to 449,904 GFF3020 GFF3021 - no description, at 449,968 to 450,150 GFF3021 GFF3022 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 450,147 to 451,199 GFF3022 GFF3023 - C4-dicarboxylate transport protein, at 451,223 to 452,497 GFF3023
Locus Name Description Strand Phenotype
GFF3013 KEGG: type VI secretion system secreted protein Hcp + insig.
GFF3014 KEGG: type VI secretion system protein ImpF + insig.
GFF3015 T6SS component TssF (ImpG/VasA) + insig.
GFF3016 T6SS component TssG (ImpH/VasB) + no data
GFF3017 T6SS AAA+ chaperone ClpV (TssH) + insig.
GFF3018 VgrG protein + insig.
GFF3019 hypothetical protein + insig.
GFF3020 FIG00966904: hypothetical protein + no data
GFF3021 no description + no data
GFF3022 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF3023 C4-dicarboxylate transport protein + insig.

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