Gene info for GFF2945 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Lipopolysaccharide ABC transporter, ATP-binding protein LptB
Type 1: Protein-coding gene
Located on scaffold NODE_20_length_60491_cov_84.6091, + strand, nucleotides 25,113 to 25,838
See nucleotide sequence around GFF2945 or for all of scaffold NODE_20_length_60491_cov_84.6091

Nearby Genes

500 ntGFF2940 and GFF2941 are separated by 13 nucleotidesGFF2941 and GFF2942 are separated by 20 nucleotidesGFF2942 and GFF2943 overlap by 4 nucleotidesGFF2943 and GFF2944 overlap by 32 nucleotidesGFF2944 and GFF2945 are separated by 6 nucleotidesGFF2945 and GFF2946 are separated by 47 nucleotidesGFF2946 and GFF2947 are separated by 22 nucleotidesGFF2947 and GFF2948 are separated by 117 nucleotidesGFF2948 and GFF2949 are separated by 45 nucleotidesGFF2949 and GFF2950 overlap by 4 nucleotides GFF2940 - Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter, at 21,447 to 22,424 GFF2940 GFF2941 - Arabinose 5-phosphate isomerase (EC 5.3.1.13), at 22,438 to 23,424 GFF2941 GFF2942 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45), at 23,445 to 24,011 GFF2942 GFF2943 - Uncharacterized protein YrbK clustered with lipopolysaccharide transporters, at 24,008 to 24,583 GFF2943 GFF2944 - LptA, protein essential for LPS transport across the periplasm, at 24,552 to 25,106 GFF2944 GFF2945 - Lipopolysaccharide ABC transporter, ATP-binding protein LptB, at 25,113 to 25,838 GFF2945 GFF2946 - RNA polymerase sigma-54 factor RpoN, at 25,886 to 27,319 GFF2946 GFF2947 - Ribosome hibernation protein YhbH, at 27,342 to 27,629 GFF2947 GFF2948 - PTS system nitrogen-specific IIA component, PtsN, at 27,747 to 28,238 GFF2948 GFF2949 - Hypothetical ATP-binding protein UPF0042, contains P-loop, at 28,284 to 29,138 GFF2949 GFF2950 - Phosphocarrier protein, nitrogen regulation associated, at 29,135 to 29,407 GFF2950
Locus Name Description Strand Phenotype
GFF2940 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter + cofit
GFF2941 Arabinose 5-phosphate isomerase (EC 5.3.1.13) + cofit
GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) + strong
GFF2943 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters + insig.
GFF2944 LptA, protein essential for LPS transport across the periplasm + no data
GFF2945 Lipopolysaccharide ABC transporter, ATP-binding protein LptB + no data
GFF2946 RNA polymerase sigma-54 factor RpoN + strong
GFF2947 Ribosome hibernation protein YhbH + cofit
GFF2948 PTS system nitrogen-specific IIA component, PtsN + strong
GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop + cofit
GFF2950 Phosphocarrier protein, nitrogen regulation associated + no data

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