Gene info for GFF2913 in Variovorax sp. SCN45

Annotation: ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 340,739 to 341,395
See nucleotide sequence around GFF2913 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF2908 and GFF2909 are separated by 38 nucleotidesGFF2909 and GFF2910 are separated by 51 nucleotidesGFF2910 and GFF2911 are separated by 111 nucleotidesGFF2911 and GFF2912 are separated by 99 nucleotidesGFF2912 and GFF2913 overlap by 4 nucleotidesGFF2913 and GFF2914 overlap by 17 nucleotidesGFF2914 and GFF2915 are separated by 56 nucleotidesGFF2915 and GFF2916 are separated by 14 nucleotidesGFF2916 and GFF2917 overlap by 11 nucleotidesGFF2917 and GFF2918 are separated by 56 nucleotides GFF2908 - BUG/TctC family periplasmic protein, at 335,896 to 336,897 GFF2908 GFF2909 - 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41), at 336,936 to 337,847 GFF2909 GFF2910 - BUG/TctC family periplasmic protein, at 337,899 to 338,897 GFF2910 GFF2911 - Predicted D-glucarate or D-galactorate regulator, GntR family, at 339,009 to 339,893 GFF2911 GFF2912 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 339,993 to 340,742 GFF2912 GFF2913 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 340,739 to 341,395 GFF2913 GFF2914 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 341,379 to 342,107 GFF2914 GFF2915 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 342,164 to 342,958 GFF2915 GFF2916 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 342,973 to 343,794 GFF2916 GFF2917 - Gluconolactonase (EC 3.1.1.17), at 343,784 to 344,674 GFF2917 GFF2918 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 344,731 to 345,723 GFF2918
Locus Name Description Strand Phenotype
GFF2908 BUG/TctC family periplasmic protein - insig.
GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) - cofit
GFF2910 BUG/TctC family periplasmic protein - insig.
GFF2911 Predicted D-glucarate or D-galactorate regulator, GntR family - sig.
GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF2913 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF2914 Glutamine ABC transporter, ATP-binding protein GlnQ + insig.
GFF2915 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) + no data
GFF2916 UDP-glucose 4-epimerase (EC 5.1.3.2) + insig.
GFF2917 Gluconolactonase (EC 3.1.1.17) + insig.
GFF2918 TRAP-type C4-dicarboxylate transport system, periplasmic component + insig.

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