Gene info for GFF2909 in Variovorax sp. SCN45

Annotation: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, - strand, nucleotides 336,936 to 337,847
See nucleotide sequence around GFF2909 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF2904 and GFF2905 are separated by 213 nucleotidesGFF2905 and GFF2906 are separated by 767 nucleotidesGFF2906 and GFF2907 are separated by 13 nucleotidesGFF2907 and GFF2908 are separated by 2 nucleotidesGFF2908 and GFF2909 are separated by 38 nucleotidesGFF2909 and GFF2910 are separated by 51 nucleotidesGFF2910 and GFF2911 are separated by 111 nucleotidesGFF2911 and GFF2912 are separated by 99 nucleotidesGFF2912 and GFF2913 overlap by 4 nucleotidesGFF2913 and GFF2914 overlap by 17 nucleotides GFF2904 - hypothetical protein, at 329,966 to 330,697 GFF2904 GFF2905 - surface antigen gene, at 330,911 to 332,317 GFF2905 GFF2906 - 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26), at 333,085 to 334,521 GFF2906 GFF2907 - Glucarate dehydratase (EC 4.2.1.40), at 334,535 to 335,893 GFF2907 GFF2908 - BUG/TctC family periplasmic protein, at 335,896 to 336,897 GFF2908 GFF2909 - 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41), at 336,936 to 337,847 GFF2909 GFF2910 - BUG/TctC family periplasmic protein, at 337,899 to 338,897 GFF2910 GFF2911 - Predicted D-glucarate or D-galactorate regulator, GntR family, at 339,009 to 339,893 GFF2911 GFF2912 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 339,993 to 340,742 GFF2912 GFF2913 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 340,739 to 341,395 GFF2913 GFF2914 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 341,379 to 342,107 GFF2914
Locus Name Description Strand Phenotype
GFF2904 hypothetical protein + insig.
GFF2905 surface antigen gene + insig.
GFF2906 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) - insig.
GFF2907 Glucarate dehydratase (EC 4.2.1.40) - insig.
GFF2908 BUG/TctC family periplasmic protein - insig.
GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) - cofit
GFF2910 BUG/TctC family periplasmic protein - insig.
GFF2911 Predicted D-glucarate or D-galactorate regulator, GntR family - sig.
GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF2913 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF2914 Glutamine ABC transporter, ATP-binding protein GlnQ + insig.

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