Gene info for GFF2888 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: regulator of length of O-antigen component of lipopolysaccharide chains
Type 1: Protein-coding gene
Located on scaffold NODE_31_length_36201_cov_86.3292, - strand, nucleotides 11,956 to 13,002
See nucleotide sequence around GFF2888 or for all of scaffold NODE_31_length_36201_cov_86.3292

Nearby Genes

500 ntGFF2883 and GFF2884 overlap by 23 nucleotidesGFF2884 and GFF2885 are separated by 32 nucleotidesGFF2885 and GFF2886 overlap by 1 nucleotidesGFF2886 and GFF2887 overlap by 4 nucleotidesGFF2887 and GFF2888 are separated by 100 nucleotidesGFF2888 and GFF2889 are separated by 11 nucleotidesGFF2889 and GFF2890 are separated by 229 nucleotidesGFF2890 and GFF2891 are separated by 418 nucleotidesGFF2891 and GFF2892 are separated by 143 nucleotidesGFF2892 and GFF2893 are separated by 118 nucleotides GFF2883 - Lipopolysaccharide biosynthesis protein RffC, at 7,532 to 8,209 GFF2883 GFF2884 - Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24), at 8,187 to 8,411 GFF2884 GFF2885 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 8,444 to 9,511 GFF2885 GFF2886 - UDP-glucose dehydrogenase (EC 1.1.1.22), at 9,511 to 10,773 GFF2886 GFF2887 - UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14), at 10,770 to 11,855 GFF2887 GFF2888 - regulator of length of O-antigen component of lipopolysaccharide chains, at 11,956 to 13,002 GFF2888 GFF2889 - Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-), at 13,014 to 14,117 GFF2889 GFF2890 - Transcription termination factor Rho, at 14,347 to 15,606 GFF2890 GFF2891 - Thioredoxin, at 16,025 to 16,354 GFF2891 GFF2892 - ATP-dependent RNA helicase RhlB, at 16,498 to 17,763 GFF2892 GFF2893 - 'Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) @ Exopolyphosphatase (EC 3.6.1.11)' transl_table=11, at 17,882 to 19,363 GFF2893
Locus Name Description Strand Phenotype
GFF2883 Lipopolysaccharide biosynthesis protein RffC - no data
GFF2884 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) - insig.
GFF2885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) - cofit
GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) - cofit
GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) - cofit
GFF2888 regulator of length of O-antigen component of lipopolysaccharide chains - strong
GFF2889 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) - strong
GFF2890 Transcription termination factor Rho - no data
GFF2891 Thioredoxin - sig.
GFF2892 ATP-dependent RNA helicase RhlB + strong
GFF2893 'Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) @ Exopolyphosphatase (EC 3.6.1.11)' transl_table=11 + strong

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