Gene info for GFF2852 in Variovorax sp. SCN45

Annotation: Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8)
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, - strand, nucleotides 274,774 to 276,696
See nucleotide sequence around GFF2852 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF2847 and GFF2848 are separated by 433 nucleotidesGFF2848 and GFF2849 are separated by 152 nucleotidesGFF2849 and GFF2850 are separated by 47 nucleotidesGFF2850 and GFF2851 are separated by 21 nucleotidesGFF2851 and GFF2852 are separated by 107 nucleotidesGFF2852 and GFF2853 are separated by 184 nucleotidesGFF2853 and GFF2854 are separated by 220 nucleotidesGFF2854 and GFF2855 overlap by 4 nucleotidesGFF2855 and GFF2856 are separated by 38 nucleotidesGFF2856 and GFF2857 are separated by 24 nucleotides GFF2847 - histone-like nucleoid-structuring protein H-NS, at 271,815 to 272,159 GFF2847 GFF2848 - UPF0098 protein PH1269, at 272,593 to 273,225 GFF2848 GFF2849 - hypothetical protein, at 273,378 to 273,626 GFF2849 GFF2850 - hypothetical protein, at 273,674 to 273,970 GFF2850 GFF2851 - Phosphoglycerate mutase family protein, at 273,992 to 274,666 GFF2851 GFF2852 - Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8), at 274,774 to 276,696 GFF2852 GFF2853 - DNA-binding protein HU-beta, at 276,881 to 277,153 GFF2853 GFF2854 - D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83), at 277,374 to 278,459 GFF2854 GFF2855 - Putative hydrolase or acyltransferase, at 278,456 to 279,400 GFF2855 GFF2856 - Transcriptional regulator, LysR family, at 279,439 to 280,398 GFF2856 GFF2857 - Permease of the drug/metabolite transporter (DMT) superfamily, at 280,423 to 281,310 GFF2857
Locus Name Description Strand Phenotype
GFF2847 histone-like nucleoid-structuring protein H-NS - strong
GFF2848 UPF0098 protein PH1269 - cofit
GFF2849 hypothetical protein + insig.
GFF2850 hypothetical protein + insig.
GFF2851 Phosphoglycerate mutase family protein - insig.
GFF2852 Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) - cofit
GFF2853 DNA-binding protein HU-beta - insig.
GFF2854 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) - insig.
GFF2855 Putative hydrolase or acyltransferase - cofit
GFF2856 Transcriptional regulator, LysR family + cofit
GFF2857 Permease of the drug/metabolite transporter (DMT) superfamily - insig.

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