Gene info for GFF2838 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000005, + strand, nucleotides 263,870 to 264,082
See nucleotide sequence around GFF2838 or for all of scaffold scaffold00000005

Nearby Genes

500 ntGFF2833 and GFF2834 are separated by 114 nucleotidesGFF2834 and GFF2835 are separated by 77 nucleotidesGFF2835 and GFF2836 are separated by 22 nucleotidesGFF2836 and GFF2837 are separated by 5 nucleotidesGFF2837 and GFF2838 are separated by 94 nucleotidesGFF2838 and GFF2839 are separated by 183 nucleotidesGFF2839 and GFF2840 are separated by 193 nucleotidesGFF2840 and GFF2841 are separated by 59 nucleotidesGFF2841 and GFF2842 are separated by 41 nucleotidesGFF2842 and GFF2843 are separated by 4 nucleotides GFF2833 - PKHD-type hydroxylase YbiX, at 260,750 to 261,430 GFF2833 GFF2834 - Bacterioferritin-associated ferredoxin, at 261,545 to 261,817 GFF2834 GFF2835 - putative TonB-dependent receptor, at 261,895 to 262,620 GFF2835 GFF2836 - MotA/TolQ/ExbB proton channel family protein, at 262,643 to 263,356 GFF2836 GFF2837 - Biopolymer transport protein ExbD/TolR, at 263,362 to 263,775 GFF2837 GFF2838 - hypothetical protein, at 263,870 to 264,082 GFF2838 GFF2839 - Protein GlcG, at 264,266 to 264,673 GFF2839 GFF2840 - Integral membrane protein, interacts with FtsH, at 264,867 to 265,568 GFF2840 GFF2841 - 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190), at 265,628 to 267,064 GFF2841 GFF2842 - RNA polymerase sigma factor RpoS, at 267,106 to 268,152 GFF2842 GFF2843 - Murein hydrolase activator NlpD, at 268,157 to 269,068 GFF2843
Locus Name Description Strand Phenotype
GFF2833 PKHD-type hydroxylase YbiX + insig.
GFF2834 Bacterioferritin-associated ferredoxin + no data
GFF2835 putative TonB-dependent receptor + cofit
GFF2836 MotA/TolQ/ExbB proton channel family protein + strong
GFF2837 Biopolymer transport protein ExbD/TolR + no data
GFF2838 hypothetical protein + insig.
GFF2839 Protein GlcG - insig.
GFF2840 Integral membrane protein, interacts with FtsH + insig.
GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) - cofit
GFF2842 RNA polymerase sigma factor RpoS - insig.
GFF2843 Murein hydrolase activator NlpD - strong

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