Gene info for GFF2512 in Variovorax sp. SCN45

Annotation: LSU ribosomal protein L21p
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 574,549 to 574,860
See nucleotide sequence around GFF2512 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2507 and GFF2508 are separated by 11 nucleotidesGFF2508 and GFF2509 overlap by 1 nucleotidesGFF2509 and GFF2510 are separated by 26 nucleotidesGFF2510 and GFF2511 are separated by 242 nucleotidesGFF2511 and GFF2512 are separated by 246 nucleotidesGFF2512 and GFF2513 are separated by 12 nucleotidesGFF2513 and GFF2514 are separated by 71 nucleotidesGFF2514 and GFF2515 are separated by 101 nucleotidesGFF2515 and GFF2516 are separated by 43 nucleotidesGFF2516 and GFF2517 overlap by 50 nucleotides GFF2507 - Dephospho-CoA kinase (EC 2.7.1.24), at 568,556 to 569,164 GFF2507 GFF2508 - Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-), at 569,176 to 570,141 GFF2508 GFF2509 - Type IV fimbrial assembly protein PilC, at 570,141 to 571,370 GFF2509 GFF2510 - Type IV fimbrial assembly, ATPase PilB, at 571,397 to 573,130 GFF2510 GFF2511 - Octaprenyl diphosphate synthase (EC 2.5.1.90), at 573,373 to 574,302 GFF2511 GFF2512 - LSU ribosomal protein L21p, at 574,549 to 574,860 GFF2512 GFF2513 - LSU ribosomal protein L27p, at 574,873 to 575,133 GFF2513 GFF2514 - GTP-binding protein Obg, at 575,205 to 576,281 GFF2514 GFF2515 - Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA, at 576,383 to 577,495 GFF2515 GFF2516 - hypothetical protein, at 577,539 to 578,129 GFF2516 GFF2517 - Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase, at 578,080 to 578,745 GFF2517
Locus Name Description Strand Phenotype
GFF2507 Dephospho-CoA kinase (EC 2.7.1.24) - no data
GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) - strong
GFF2509 Type IV fimbrial assembly protein PilC - strong
GFF2510 Type IV fimbrial assembly, ATPase PilB - strong
GFF2511 Octaprenyl diphosphate synthase (EC 2.5.1.90) - no data
GFF2512 LSU ribosomal protein L21p + no data
GFF2513 LSU ribosomal protein L27p + no data
GFF2514 GTP-binding protein Obg + no data
GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA + cofit
GFF2516 hypothetical protein - insig.
GFF2517 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase - cofit

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