Gene info for GFF2488 in Variovorax sp. SCN45

Annotation: Two-component transcriptional response regulator, LuxR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 547,053 to 548,093
See nucleotide sequence around GFF2488 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2483 and GFF2484 overlap by 1 nucleotidesGFF2484 and GFF2485 are separated by 13 nucleotidesGFF2485 and GFF2486 are separated by 25 nucleotidesGFF2486 and GFF2487 are separated by 104 nucleotidesGFF2487 and GFF2488 overlap by 4 nucleotidesGFF2488 and GFF2489 are separated by 127 nucleotidesGFF2489 and GFF2490 are separated by 7 nucleotidesGFF2490 and GFF2491 are separated by 177 nucleotidesGFF2491 and GFF2492 are separated by 16 nucleotidesGFF2492 and GFF2493 are separated by 12 nucleotides GFF2483 - Urease alpha subunit (EC 3.5.1.5), at 540,349 to 542,067 GFF2483 GFF2484 - Urease beta subunit (EC 3.5.1.5), at 542,067 to 542,372 GFF2484 GFF2485 - Nickel-binding accessory protein UreJ-HupE, at 542,386 to 542,985 GFF2485 GFF2486 - Urease gamma subunit (EC 3.5.1.5), at 543,011 to 543,313 GFF2486 GFF2487 - Two-component system sensor histidine kinase/response regulator hybrid, at 543,418 to 547,056 GFF2487 GFF2488 - Two-component transcriptional response regulator, LuxR family, at 547,053 to 548,093 GFF2488 GFF2489 - hypothetical protein, at 548,221 to 548,880 GFF2489 GFF2490 - Transcriptional regulator, LysR family, at 548,888 to 549,808 GFF2490 GFF2491 - Threonine-synthase-like protein 3, at 549,986 to 551,134 GFF2491 GFF2492 - BUG/TctC family periplasmic protein, at 551,151 to 552,131 GFF2492 GFF2493 - YheO-like PAS domain, at 552,144 to 552,770 GFF2493
Locus Name Description Strand Phenotype
GFF2483 Urease alpha subunit (EC 3.5.1.5) - insig.
GFF2484 Urease beta subunit (EC 3.5.1.5) - insig.
GFF2485 Nickel-binding accessory protein UreJ-HupE - no data
GFF2486 Urease gamma subunit (EC 3.5.1.5) - insig.
GFF2487 Two-component system sensor histidine kinase/response regulator hybrid + insig.
GFF2488 Two-component transcriptional response regulator, LuxR family + insig.
GFF2489 hypothetical protein + insig.
GFF2490 Transcriptional regulator, LysR family - insig.
GFF2491 Threonine-synthase-like protein 3 + insig.
GFF2492 BUG/TctC family periplasmic protein + insig.
GFF2493 YheO-like PAS domain - insig.

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