Gene info for GFF2428 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 478,849 to 479,763
See nucleotide sequence around GFF2428 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2423 and GFF2424 overlap by 4 nucleotidesGFF2424 and GFF2425 overlap by 4 nucleotidesGFF2425 and GFF2426 are separated by 33 nucleotidesGFF2426 and GFF2427 are separated by 160 nucleotidesGFF2427 and GFF2428 are separated by 14 nucleotidesGFF2428 and GFF2429 are separated by 7 nucleotidesGFF2429 and GFF2430 are separated by 22 nucleotidesGFF2430 and GFF2431 are separated by 158 nucleotidesGFF2431 and GFF2432 overlap by 4 nucleotidesGFF2432 and GFF2433 are separated by 107 nucleotides GFF2423 - Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1), at 474,255 to 475,046 GFF2423 GFF2424 - ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron), at 475,043 to 475,894 GFF2424 GFF2425 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 475,891 to 476,982 GFF2425 GFF2426 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 477,016 to 478,050 GFF2426 GFF2427 - Transcriptional regulator, MarR family, at 478,211 to 478,834 GFF2427 GFF2428 - Transcriptional regulator, LysR family, at 478,849 to 479,763 GFF2428 GFF2429 - putative membrane protein, at 479,771 to 480,595 GFF2429 GFF2430 - Protein secretion chaperonin CsaA, at 480,618 to 480,977 GFF2430 GFF2431 - RNA polymerase ECF-type sigma factor, at 481,136 to 481,663 GFF2431 GFF2432 - Fe2+-dicitrate sensor, membrane component, at 481,660 to 482,652 GFF2432 GFF2433 - Putative OMR family iron-siderophore receptor precursor, at 482,760 to 485,210 GFF2433
Locus Name Description Strand Phenotype
GFF2423 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) - insig.
GFF2424 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) - insig.
GFF2425 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) - insig.
GFF2426 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) - insig.
GFF2427 Transcriptional regulator, MarR family + insig.
GFF2428 Transcriptional regulator, LysR family + no data
GFF2429 putative membrane protein + insig.
GFF2430 Protein secretion chaperonin CsaA - insig.
GFF2431 RNA polymerase ECF-type sigma factor + insig.
GFF2432 Fe2+-dicitrate sensor, membrane component + insig.
GFF2433 Putative OMR family iron-siderophore receptor precursor + insig.

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