Gene info for GFF2397 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Type 1: Protein-coding gene
Located on scaffold NODE_34_length_26265_cov_94.3531, + strand, nucleotides 24,280 to 25,098
See nucleotide sequence around GFF2397 or for all of scaffold NODE_34_length_26265_cov_94.3531

Nearby Genes

500 ntGFF2392 and GFF2393 are separated by 131 nucleotidesGFF2393 and GFF2394 overlap by 29 nucleotidesGFF2394 and GFF2395 are separated by 26 nucleotidesGFF2395 and GFF2396 are separated by 4 nucleotidesGFF2396 and GFF2397 are separated by 4 nucleotidesGFF2397 and GFF2398 overlap by 4 nucleotidesGFF2398 and GFF2399 overlap by 25 nucleotidesGFF2399 and GFF2400 are separated by 44 nucleotidesGFF2400 and GFF2401 are separated by 13 nucleotides GFF2392 - Peptide deformylase (EC 3.5.1.88), at 20,919 to 21,428 GFF2392 GFF2393 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 21,560 to 22,684 GFF2393 GFF2394 - Protein of unknown function Smg, at 22,656 to 23,129 GFF2394 GFF2395 - Similar to C-terminal Zn-finger domain of DNA topoisomerase I, at 23,156 to 23,698 GFF2395 GFF2396 - TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA, at 23,703 to 24,275 GFF2396 GFF2397 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 24,280 to 25,098 GFF2397 GFF2398 - FIG00640156: hypothetical protein, at 25,095 to 25,352 GFF2398 GFF2399 - carbonic anhydrase, family 3, at 25,328 to 25,882 GFF2399 GFF2400 - hypothetical protein, at 25,927 to 26,043 GFF2400 GFF2401 - hypothetical protein, at 26,057 to 26,179 GFF2401
Locus Name Description Strand Phenotype
GFF2392 Peptide deformylase (EC 3.5.1.88) - cofit
GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake + insig.
GFF2394 Protein of unknown function Smg + insig.
GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I + insig.
GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA + no data
GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) + strong
GFF2398 FIG00640156: hypothetical protein + sig.
GFF2399 carbonic anhydrase, family 3 - insig.
GFF2400 hypothetical protein - insig.
GFF2401 hypothetical protein - no data

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