Gene info for GFF2396 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA
Type 1: Protein-coding gene
Located on scaffold NODE_34_length_26265_cov_94.3531, + strand, nucleotides 23,703 to 24,275
See nucleotide sequence around GFF2396 or for all of scaffold NODE_34_length_26265_cov_94.3531

Nearby Genes

500 ntGFF2391 and GFF2392 are separated by 15 nucleotidesGFF2392 and GFF2393 are separated by 131 nucleotidesGFF2393 and GFF2394 overlap by 29 nucleotidesGFF2394 and GFF2395 are separated by 26 nucleotidesGFF2395 and GFF2396 are separated by 4 nucleotidesGFF2396 and GFF2397 are separated by 4 nucleotidesGFF2397 and GFF2398 overlap by 4 nucleotidesGFF2398 and GFF2399 overlap by 25 nucleotidesGFF2399 and GFF2400 are separated by 44 nucleotidesGFF2400 and GFF2401 are separated by 13 nucleotides GFF2391 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 19,956 to 20,903 GFF2391 GFF2392 - Peptide deformylase (EC 3.5.1.88), at 20,919 to 21,428 GFF2392 GFF2393 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 21,560 to 22,684 GFF2393 GFF2394 - Protein of unknown function Smg, at 22,656 to 23,129 GFF2394 GFF2395 - Similar to C-terminal Zn-finger domain of DNA topoisomerase I, at 23,156 to 23,698 GFF2395 GFF2396 - TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA, at 23,703 to 24,275 GFF2396 GFF2397 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 24,280 to 25,098 GFF2397 GFF2398 - FIG00640156: hypothetical protein, at 25,095 to 25,352 GFF2398 GFF2399 - carbonic anhydrase, family 3, at 25,328 to 25,882 GFF2399 GFF2400 - hypothetical protein, at 25,927 to 26,043 GFF2400 GFF2401 - hypothetical protein, at 26,057 to 26,179 GFF2401
Locus Name Description Strand Phenotype
GFF2391 Methionyl-tRNA formyltransferase (EC 2.1.2.9) - no data
GFF2392 Peptide deformylase (EC 3.5.1.88) - cofit
GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake + insig.
GFF2394 Protein of unknown function Smg + insig.
GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I + insig.
GFF2396 TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA + no data
GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) + strong
GFF2398 FIG00640156: hypothetical protein + sig.
GFF2399 carbonic anhydrase, family 3 - insig.
GFF2400 hypothetical protein - insig.
GFF2401 hypothetical protein - no data

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