Gene info for GFF2390 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967
Type 1: Protein-coding gene
Located on scaffold NODE_34_length_26265_cov_94.3531, - strand, nucleotides 18,615 to 19,904
See nucleotide sequence around GFF2390 or for all of scaffold NODE_34_length_26265_cov_94.3531

Nearby Genes

500 ntGFF2385 and GFF2386 are separated by 107 nucleotidesGFF2386 and GFF2387 are separated by 10 nucleotidesGFF2387 and GFF2388 are separated by 262 nucleotidesGFF2388 and GFF2389 are separated by 141 nucleotidesGFF2389 and GFF2390 are separated by 21 nucleotidesGFF2390 and GFF2391 are separated by 51 nucleotidesGFF2391 and GFF2392 are separated by 15 nucleotidesGFF2392 and GFF2393 are separated by 131 nucleotidesGFF2393 and GFF2394 overlap by 29 nucleotidesGFF2394 and GFF2395 are separated by 26 nucleotides GFF2385 - LSU ribosomal protein L17p, at 15,104 to 15,487 GFF2385 GFF2386 - FIG004614: Putative cytoplasmic protein, at 15,595 to 15,963 GFF2386 GFF2387 - transcriptional regulator, MerR family, at 15,974 to 16,399 GFF2387 GFF2388 - Large-conductance mechanosensitive channel, at 16,662 to 17,075 GFF2388 GFF2389 - Trk system potassium uptake protein TrkA, at 17,217 to 18,593 GFF2389 GFF2390 - 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967, at 18,615 to 19,904 GFF2390 GFF2391 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 19,956 to 20,903 GFF2391 GFF2392 - Peptide deformylase (EC 3.5.1.88), at 20,919 to 21,428 GFF2392 GFF2393 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 21,560 to 22,684 GFF2393 GFF2394 - Protein of unknown function Smg, at 22,656 to 23,129 GFF2394 GFF2395 - Similar to C-terminal Zn-finger domain of DNA topoisomerase I, at 23,156 to 23,698 GFF2395
Locus Name Description Strand Phenotype
GFF2385 LSU ribosomal protein L17p + no data
GFF2386 FIG004614: Putative cytoplasmic protein + insig.
GFF2387 transcriptional regulator, MerR family + insig.
GFF2388 Large-conductance mechanosensitive channel - insig.
GFF2389 Trk system potassium uptake protein TrkA - strong
GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 - cofit
GFF2391 Methionyl-tRNA formyltransferase (EC 2.1.2.9) - no data
GFF2392 Peptide deformylase (EC 3.5.1.88) - cofit
GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake + insig.
GFF2394 Protein of unknown function Smg + insig.
GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I + insig.

Or browse nearby genes

Or see the comparative fitness browser