Gene info for GFF2388 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Annotation: Large-conductance mechanosensitive channel
Type 1: Protein-coding gene
Located on scaffold NODE_34_length_26265_cov_94.3531, - strand, nucleotides 16,662 to 17,075
See nucleotide sequence around GFF2388 or for all of scaffold NODE_34_length_26265_cov_94.3531

Nearby Genes

500 ntGFF2383 and GFF2384 are separated by 25 nucleotidesGFF2384 and GFF2385 are separated by 40 nucleotidesGFF2385 and GFF2386 are separated by 107 nucleotidesGFF2386 and GFF2387 are separated by 10 nucleotidesGFF2387 and GFF2388 are separated by 262 nucleotidesGFF2388 and GFF2389 are separated by 141 nucleotidesGFF2389 and GFF2390 are separated by 21 nucleotidesGFF2390 and GFF2391 are separated by 51 nucleotidesGFF2391 and GFF2392 are separated by 15 nucleotidesGFF2392 and GFF2393 are separated by 131 nucleotides GFF2383 - SSU ribosomal protein S4p (S9e), at 13,440 to 14,048 GFF2383 GFF2384 - DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), at 14,074 to 15,063 GFF2384 GFF2385 - LSU ribosomal protein L17p, at 15,104 to 15,487 GFF2385 GFF2386 - FIG004614: Putative cytoplasmic protein, at 15,595 to 15,963 GFF2386 GFF2387 - transcriptional regulator, MerR family, at 15,974 to 16,399 GFF2387 GFF2388 - Large-conductance mechanosensitive channel, at 16,662 to 17,075 GFF2388 GFF2389 - Trk system potassium uptake protein TrkA, at 17,217 to 18,593 GFF2389 GFF2390 - 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967, at 18,615 to 19,904 GFF2390 GFF2391 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 19,956 to 20,903 GFF2391 GFF2392 - Peptide deformylase (EC 3.5.1.88), at 20,919 to 21,428 GFF2392 GFF2393 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 21,560 to 22,684 GFF2393
Locus Name Description Strand Phenotype
GFF2383 SSU ribosomal protein S4p (S9e) + no data
GFF2384 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) + no data
GFF2385 LSU ribosomal protein L17p + no data
GFF2386 FIG004614: Putative cytoplasmic protein + insig.
GFF2387 transcriptional regulator, MerR family + insig.
GFF2388 Large-conductance mechanosensitive channel - insig.
GFF2389 Trk system potassium uptake protein TrkA - strong
GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 - cofit
GFF2391 Methionyl-tRNA formyltransferase (EC 2.1.2.9) - no data
GFF2392 Peptide deformylase (EC 3.5.1.88) - cofit
GFF2393 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake + insig.

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