Gene info for PS417_12060 in Pseudomonas simiae WCS417

Updated annotation (from data): xylitol ABC transporter, permease component
Rationale: Specifically important for utilizing xylitol.
Original annotation: sugar ABC transporter permease
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 2,619,248 to 2,620,225
See nucleotide sequence around PS417_12060 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586031048, uniprot: A0A1N7UKA9

Nearby Genes

500 ntPS417_12035 and PS417_12040 are separated by 3 nucleotidesPS417_12040 and PS417_12045 are separated by 56 nucleotidesPS417_12045 and PS417_12050 are separated by 27 nucleotidesPS417_12050 and PS417_12055 are separated by 87 nucleotidesPS417_12055 and PS417_12060 are separated by 34 nucleotidesPS417_12060 and PS417_12065 overlap by 4 nucleotidesPS417_12065 and PS417_12070 are separated by 283 nucleotidesPS417_12070 and PS417_12075 are separated by 63 nucleotidesPS417_12075 and PS417_12080 are separated by 263 nucleotidesPS417_12080 and PS417_12085 overlap by 11 nucleotides PS417_12035: PS417_12035 - dihydroxyacetone kinase, at 2,614,511 to 2,615,158 _12035 PS417_12040: PS417_12040 - dihydroxyacetone kinase, at 2,615,162 to 2,616,163 _12040 PS417_12045: PS417_12045 - iditol 2-dehydrogenase, at 2,616,220 to 2,617,335 _12045 PS417_12050: PS417_12050 - short-chain dehydrogenase, at 2,617,363 to 2,618,118 _12050 PS417_12055: PS417_12055 - xylitol ABC transporter, substrate-binding component (from data), at 2,618,206 to 2,619,213 _12055 PS417_12060: PS417_12060 - xylitol ABC transporter, permease component (from data), at 2,619,248 to 2,620,225 _12060 PS417_12065: PS417_12065 - xylitol ABC transporter, ATPase component (from data), at 2,620,222 to 2,621,709 _12065 PS417_12070: PS417_12070 - ribose 5-phosphate isomerase, at 2,621,993 to 2,622,454 _12070 PS417_12075: PS417_12075 - DNA-binding protein, at 2,622,518 to 2,623,498 _12075 PS417_12080: PS417_12080 - membrane protein, at 2,623,762 to 2,625,324 _12080 PS417_12085: PS417_12085 - thioredoxin, at 2,625,314 to 2,625,649 _12085
Locus Name Description Strand Phenotype
PS417_12035 PS417_12035 dihydroxyacetone kinase - insig.
PS417_12040 PS417_12040 dihydroxyacetone kinase - sig.
PS417_12045 PS417_12045 iditol 2-dehydrogenase - insig.
PS417_12050 PS417_12050 short-chain dehydrogenase - sig.
PS417_12055 PS417_12055 xylitol ABC transporter, substrate-binding component (from data) - sig.
PS417_12060 PS417_12060 xylitol ABC transporter, permease component (from data) - sig.
PS417_12065 PS417_12065 xylitol ABC transporter, ATPase component (from data) - sig.
PS417_12070 PS417_12070 ribose 5-phosphate isomerase + no data
PS417_12075 PS417_12075 DNA-binding protein + strong
PS417_12080 PS417_12080 membrane protein + no data
PS417_12085 PS417_12085 thioredoxin - insig.

Or browse nearby genes

Or see the comparative fitness browser