Gene info for GFF2348 in Variovorax sp. SCN45

Annotation: LSU ribosomal protein L25p
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 398,129 to 398,809
See nucleotide sequence around GFF2348 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2343 and GFF2344 overlap by 4 nucleotidesGFF2344 and GFF2345 are separated by 112 nucleotidesGFF2345 and GFF2346 overlap by 15 nucleotidesGFF2346 and GFF2347 are separated by 36 nucleotidesGFF2347 and GFF2348 are separated by 78 nucleotidesGFF2348 and GFF2349 are separated by 86 nucleotidesGFF2349 and GFF2350 are separated by 286 nucleotidesGFF2350 and GFF2351 overlap by 4 nucleotidesGFF2351 and GFF2352 are separated by 2 nucleotidesGFF2352 and GFF2353 are separated by 81 nucleotides GFF2343 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 394,682 to 395,557 GFF2343 GFF2344 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 395,554 to 396,504 GFF2344 GFF2345 - Uncharacterized ferredoxin-like protein YfhL, at 396,617 to 396,886 GFF2345 GFF2346 - no description, at 396,872 to 397,381 GFF2346 GFF2347 - Peptidyl-tRNA hydrolase (EC 3.1.1.29), at 397,418 to 398,050 GFF2347 GFF2348 - LSU ribosomal protein L25p, at 398,129 to 398,809 GFF2348 GFF2349 - Ribose-phosphate pyrophosphokinase (EC 2.7.6.1), at 398,896 to 399,870 GFF2349 GFF2350 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148), at 400,157 to 401,053 GFF2350 GFF2351 - Outer membrane lipoprotein component of lipoprotein transport system LolB, at 401,050 to 401,586 GFF2351 GFF2352 - FIG140336: TPR domain protein, at 401,589 to 403,442 GFF2352 GFF2353 - Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23), at 403,524 to 404,336 GFF2353
Locus Name Description Strand Phenotype
GFF2343 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) - strong
GFF2344 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) - sig.
GFF2345 Uncharacterized ferredoxin-like protein YfhL + insig.
GFF2346 no description - insig.
GFF2347 Peptidyl-tRNA hydrolase (EC 3.1.1.29) - no data
GFF2348 LSU ribosomal protein L25p - no data
GFF2349 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) - no data
GFF2350 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) - no data
GFF2351 Outer membrane lipoprotein component of lipoprotein transport system LolB - no data
GFF2352 FIG140336: TPR domain protein - insig.
GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) + insig.

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