Gene info for GFF2343 in Variovorax sp. SCN45

Annotation: ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 394,682 to 395,557
See nucleotide sequence around GFF2343 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2338 and GFF2339 overlap by 10 nucleotidesGFF2339 and GFF2340 are separated by 213 nucleotidesGFF2340 and GFF2341 are separated by 120 nucleotidesGFF2341 and GFF2342 overlap by 4 nucleotidesGFF2342 and GFF2343 are separated by 5 nucleotidesGFF2343 and GFF2344 overlap by 4 nucleotidesGFF2344 and GFF2345 are separated by 112 nucleotidesGFF2345 and GFF2346 overlap by 15 nucleotidesGFF2346 and GFF2347 are separated by 36 nucleotidesGFF2347 and GFF2348 are separated by 78 nucleotides GFF2338 - Amidase family protein Atu4441, at 388,148 to 389,554 GFF2338 GFF2339 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 389,545 to 391,032 GFF2339 GFF2340 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 391,246 to 392,739 GFF2340 GFF2341 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 392,860 to 393,690 GFF2341 GFF2342 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 393,687 to 394,676 GFF2342 GFF2343 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 394,682 to 395,557 GFF2343 GFF2344 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 395,554 to 396,504 GFF2344 GFF2345 - Uncharacterized ferredoxin-like protein YfhL, at 396,617 to 396,886 GFF2345 GFF2346 - no description, at 396,872 to 397,381 GFF2346 GFF2347 - Peptidyl-tRNA hydrolase (EC 3.1.1.29), at 397,418 to 398,050 GFF2347 GFF2348 - LSU ribosomal protein L25p, at 398,129 to 398,809 GFF2348
Locus Name Description Strand Phenotype
GFF2338 Amidase family protein Atu4441 - insig.
GFF2339 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) - insig.
GFF2340 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) - insig.
GFF2341 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) - insig.
GFF2342 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) - insig.
GFF2343 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) - strong
GFF2344 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) - sig.
GFF2345 Uncharacterized ferredoxin-like protein YfhL + insig.
GFF2346 no description - insig.
GFF2347 Peptidyl-tRNA hydrolase (EC 3.1.1.29) - no data
GFF2348 LSU ribosomal protein L25p - no data

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