Gene info for PS417_11885 in Pseudomonas simiae WCS417

Updated annotation (from data): Inositol transport system sugar-binding protein
Rationale: specific phenotype on inositol. SEED_correct
Original annotation: rhizopine-binding protein
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 2,588,230 to 2,589,159
See nucleotide sequence around PS417_11885 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586031014, uniprot: A0A1N7TYU2

Nearby Genes

500 ntPS417_11860 and PS417_11865 are separated by 28 nucleotidesPS417_11865 and PS417_11870 are separated by 149 nucleotidesPS417_11870 and PS417_11875 are separated by 19 nucleotidesPS417_11875 and PS417_11880 are separated by 155 nucleotidesPS417_11880 and PS417_11885 are separated by 350 nucleotidesPS417_11885 and PS417_11890 are separated by 65 nucleotidesPS417_11890 and PS417_11895 are separated by 26 nucleotidesPS417_11895 and PS417_11900 are separated by 423 nucleotidesPS417_11900 and PS417_11905 are separated by 180 nucleotidesPS417_11905 and PS417_11910 are separated by 115 nucleotides PS417_11860: PS417_11860 - 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data), at 2,581,946 to 2,582,734 _11860 PS417_11865: PS417_11865 - xylose isomerase, at 2,582,763 to 2,583,584 _11865 PS417_11870: PS417_11870 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data), at 2,583,734 to 2,585,665 _11870 PS417_11875: PS417_11875 - Inositol 2-dehydrogenase (EC 1.1.1.18) (from data), at 2,585,685 to 2,586,695 _11875 PS417_11880: PS417_11880 - oxidoreductase, at 2,586,851 to 2,587,879 _11880 PS417_11885: PS417_11885 - Inositol transport system sugar-binding protein (from data), at 2,588,230 to 2,589,159 _11885 PS417_11890: PS417_11890 - Inositol transport system ATP-binding protein (from data), at 2,589,225 to 2,590,778 _11890 PS417_11895: PS417_11895 - Inositol transport system permease protein (from data), at 2,590,805 to 2,591,827 _11895 PS417_11900: PS417_11900 - conjugal transfer protein TraR, at 2,592,251 to 2,592,655 _11900 PS417_11905: PS417_11905 - chemotaxis protein, at 2,592,836 to 2,594,431 _11905 PS417_11910: PS417_11910 - hypothetical protein, at 2,594,547 to 2,594,750 _11910
Locus Name Description Strand Phenotype
PS417_11860 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) + strong
PS417_11865 PS417_11865 xylose isomerase + insig.
PS417_11870 PS417_11870 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) + strong
PS417_11875 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) + strong
PS417_11880 PS417_11880 oxidoreductase + strong
PS417_11885 PS417_11885 Inositol transport system sugar-binding protein (from data) + strong
PS417_11890 PS417_11890 Inositol transport system ATP-binding protein (from data) + strong
PS417_11895 PS417_11895 Inositol transport system permease protein (from data) + strong
PS417_11900 PS417_11900 conjugal transfer protein TraR + strong
PS417_11905 PS417_11905 chemotaxis protein + insig.
PS417_11910 PS417_11910 hypothetical protein + no data

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