Gene info for PS417_11860 in Pseudomonas simiae WCS417

Updated annotation (from data): 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30)
Rationale: Specifically important for utilizing m-Inositol.
Original annotation: 5-deoxyglucuronate isomerase
Type 1: Protein-coding gene
Located on scaffold CP007637, + strand, nucleotides 2,581,946 to 2,582,734
See nucleotide sequence around PS417_11860 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586031009, uniprot: A0A1N7TX27

Nearby Genes

500 ntPS417_11835 and PS417_11840 are separated by 92 nucleotidesPS417_11840 and PS417_11845 are separated by 6 nucleotidesPS417_11845 and PS417_11850 are separated by 284 nucleotidesPS417_11850 and PS417_11855 are separated by 150 nucleotidesPS417_11855 and PS417_11860 are separated by 3 nucleotidesPS417_11860 and PS417_11865 are separated by 28 nucleotidesPS417_11865 and PS417_11870 are separated by 149 nucleotidesPS417_11870 and PS417_11875 are separated by 19 nucleotidesPS417_11875 and PS417_11880 are separated by 155 nucleotidesPS417_11880 and PS417_11885 are separated by 350 nucleotides PS417_11835: PS417_11835 - MFS transporter, at 2,575,051 to 2,576,262 _11835 PS417_11840: PS417_11840 - GntR family transcriptional regulator, at 2,576,355 to 2,577,767 _11840 PS417_11845: PS417_11845 - RpiR family transcriptional regulator, at 2,577,774 to 2,578,682 _11845 PS417_11850: PS417_11850 - 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data), at 2,578,967 to 2,580,904 _11850 PS417_11855: PS417_11855 - Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data), at 2,581,055 to 2,581,942 _11855 PS417_11860: PS417_11860 - 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data), at 2,581,946 to 2,582,734 _11860 PS417_11865: PS417_11865 - xylose isomerase, at 2,582,763 to 2,583,584 _11865 PS417_11870: PS417_11870 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data), at 2,583,734 to 2,585,665 _11870 PS417_11875: PS417_11875 - Inositol 2-dehydrogenase (EC 1.1.1.18) (from data), at 2,585,685 to 2,586,695 _11875 PS417_11880: PS417_11880 - oxidoreductase, at 2,586,851 to 2,587,879 _11880 PS417_11885: PS417_11885 - Inositol transport system sugar-binding protein (from data), at 2,588,230 to 2,589,159 _11885
Locus Name Description Strand Phenotype
PS417_11835 PS417_11835 MFS transporter - insig.
PS417_11840 PS417_11840 GntR family transcriptional regulator + insig.
PS417_11845 PS417_11845 RpiR family transcriptional regulator - strong
PS417_11850 PS417_11850 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) + strong
PS417_11855 PS417_11855 Myo-inosose-2 dehydratase (EC 4.2.1.44) (from data) + strong
PS417_11860 PS417_11860 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data) + strong
PS417_11865 PS417_11865 xylose isomerase + insig.
PS417_11870 PS417_11870 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase IolD (EC 3.7.1.22) (from data) + strong
PS417_11875 PS417_11875 Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) + strong
PS417_11880 PS417_11880 oxidoreductase + strong
PS417_11885 PS417_11885 Inositol transport system sugar-binding protein (from data) + strong

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