Gene info for GFF2252 in Variovorax sp. SCN45

Annotation: RNA-2',3'-PO4:RNA-5'-OH ligase
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 308,221 to 309,456
See nucleotide sequence around GFF2252 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2247 and GFF2248 are separated by 35 nucleotidesGFF2248 and GFF2249 are separated by 47 nucleotidesGFF2249 and GFF2250 are separated by 512 nucleotidesGFF2250 and GFF2251 are separated by 55 nucleotidesGFF2251 and GFF2252 are separated by 16 nucleotidesGFF2252 and GFF2253 are separated by 4 nucleotidesGFF2253 and GFF2254 are separated by 58 nucleotidesGFF2254 and GFF2255 are separated by 8 nucleotidesGFF2255 and GFF2256 are separated by 16 nucleotidesGFF2256 and GFF2257 overlap by 8 nucleotides GFF2247 - hypothetical protein, at 303,623 to 304,150 GFF2247 GFF2248 - Transcriptional regulatory protein RtcR, at 304,186 to 305,808 GFF2248 GFF2249 - no description, at 305,856 to 305,990 GFF2249 GFF2250 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 306,503 to 307,654 GFF2250 GFF2251 - no description, at 307,710 to 308,204 GFF2251 GFF2252 - RNA-2',3'-PO4:RNA-5'-OH ligase, at 308,221 to 309,456 GFF2252 GFF2253 - no description, at 309,461 to 309,748 GFF2253 GFF2254 - HYPOTHETICAL/UNKNOWN PROTEIN, at 309,807 to 310,448 GFF2254 GFF2255 - Ribonuclease Z (EC 3.1.26.11), at 310,457 to 311,413 GFF2255 GFF2256 - Uncharacterized protein YcgL, at 311,430 to 312,281 GFF2256 GFF2257 - RNA 3'-terminal phosphate cyclase (EC 6.5.1.4), at 312,274 to 313,311 GFF2257
Locus Name Description Strand Phenotype
GFF2247 hypothetical protein - insig.
GFF2248 Transcriptional regulatory protein RtcR - insig.
GFF2249 no description - insig.
GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 + sig.
GFF2251 no description + insig.
GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase + sig.
GFF2253 no description + insig.
GFF2254 HYPOTHETICAL/UNKNOWN PROTEIN + insig.
GFF2255 Ribonuclease Z (EC 3.1.26.11) + insig.
GFF2256 Uncharacterized protein YcgL + insig.
GFF2257 RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) + insig.

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