Gene info for GFF2248 in Variovorax sp. SCN45

Annotation: Transcriptional regulatory protein RtcR
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 304,186 to 305,808
See nucleotide sequence around GFF2248 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2243 and GFF2244 overlap by 4 nucleotidesGFF2244 and GFF2245 overlap by 4 nucleotidesGFF2245 and GFF2246 are separated by 36 nucleotidesGFF2246 and GFF2247 are separated by 10 nucleotidesGFF2247 and GFF2248 are separated by 35 nucleotidesGFF2248 and GFF2249 are separated by 47 nucleotidesGFF2249 and GFF2250 are separated by 512 nucleotidesGFF2250 and GFF2251 are separated by 55 nucleotidesGFF2251 and GFF2252 are separated by 16 nucleotidesGFF2252 and GFF2253 are separated by 4 nucleotides GFF2243 - Ornithine cyclodeaminase (EC 4.3.1.12), at 300,828 to 301,787 GFF2243 GFF2244 - hypothetical protein, at 301,784 to 302,647 GFF2244 GFF2245 - Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3), at 302,644 to 303,219 GFF2245 GFF2246 - cellular communication/signal transduction, at 303,256 to 303,612 GFF2246 GFF2247 - hypothetical protein, at 303,623 to 304,150 GFF2247 GFF2248 - Transcriptional regulatory protein RtcR, at 304,186 to 305,808 GFF2248 GFF2249 - no description, at 305,856 to 305,990 GFF2249 GFF2250 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 306,503 to 307,654 GFF2250 GFF2251 - no description, at 307,710 to 308,204 GFF2251 GFF2252 - RNA-2',3'-PO4:RNA-5'-OH ligase, at 308,221 to 309,456 GFF2252 GFF2253 - no description, at 309,461 to 309,748 GFF2253
Locus Name Description Strand Phenotype
GFF2243 Ornithine cyclodeaminase (EC 4.3.1.12) - insig.
GFF2244 hypothetical protein - insig.
GFF2245 Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) - insig.
GFF2246 cellular communication/signal transduction - insig.
GFF2247 hypothetical protein - insig.
GFF2248 Transcriptional regulatory protein RtcR - insig.
GFF2249 no description - insig.
GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 + sig.
GFF2251 no description + insig.
GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase + sig.
GFF2253 no description + insig.

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