Gene info for GFF2227 in Variovorax sp. SCN45

Annotation: Tricarboxylate transport protein TctC
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 288,581 to 289,588
See nucleotide sequence around GFF2227 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2222 and GFF2223 are separated by 139 nucleotidesGFF2223 and GFF2224 overlap by 8 nucleotidesGFF2224 and GFF2225 overlap by 4 nucleotidesGFF2225 and GFF2226 overlap by 23 nucleotidesGFF2226 and GFF2227 are separated by 175 nucleotidesGFF2227 and GFF2228 are separated by 18 nucleotidesGFF2228 and GFF2229 are separated by 79 nucleotidesGFF2229 and GFF2230 are separated by 136 nucleotidesGFF2230 and GFF2231 overlap by 4 nucleotidesGFF2231 and GFF2232 are separated by 34 nucleotides GFF2222 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 284,450 to 285,169 GFF2222 GFF2223 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 285,309 to 286,025 GFF2223 GFF2224 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 286,018 to 286,884 GFF2224 GFF2225 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 286,881 to 287,924 GFF2225 GFF2226 - no description, at 287,902 to 288,405 GFF2226 GFF2227 - Tricarboxylate transport protein TctC, at 288,581 to 289,588 GFF2227 GFF2228 - glycerophosphoryl diester phosphodiesterase, at 289,607 to 291,082 GFF2228 GFF2229 - Pca regulon regulatory protein PcaR, at 291,162 to 291,947 GFF2229 GFF2230 - 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6), at 292,084 to 292,785 GFF2230 GFF2231 - 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6), at 292,782 to 293,429 GFF2231 GFF2232 - Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174), at 293,464 to 294,669 GFF2232
Locus Name Description Strand Phenotype
GFF2222 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2223 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2224 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2225 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2226 no description - insig.
GFF2227 Tricarboxylate transport protein TctC + insig.
GFF2228 glycerophosphoryl diester phosphodiesterase - insig.
GFF2229 Pca regulon regulatory protein PcaR - insig.
GFF2230 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) + insig.
GFF2231 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) + insig.
GFF2232 Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174) + insig.

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