Gene info for GFF2213 in Variovorax sp. SCN45

Annotation: Flp pilus assembly protein, pilin Flp
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 275,196 to 275,381
See nucleotide sequence around GFF2213 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2208 and GFF2209 are separated by 4 nucleotidesGFF2209 and GFF2210 are separated by 40 nucleotidesGFF2210 and GFF2211 are separated by 39 nucleotidesGFF2211 and GFF2212 are separated by 81 nucleotidesGFF2212 and GFF2213 are separated by 15 nucleotidesGFF2213 and GFF2214 are separated by 61 nucleotidesGFF2214 and GFF2215 are separated by 414 nucleotidesGFF2215 and GFF2216 are separated by 77 nucleotidesGFF2216 and GFF2217 are separated by 139 nucleotidesGFF2217 and GFF2218 are separated by 122 nucleotides GFF2208 - Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily, at 269,527 to 270,840 GFF2208 GFF2209 - hypothetical protein, at 270,845 to 272,128 GFF2209 GFF2210 - Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly, at 272,169 to 273,560 GFF2210 GFF2211 - Flp pilus assembly protein RcpC/CpaB, at 273,600 to 274,595 GFF2211 GFF2212 - KEGG: prepilin peptidase CpaA , at 274,677 to 275,180 GFF2212 GFF2213 - Flp pilus assembly protein, pilin Flp, at 275,196 to 275,381 GFF2213 GFF2214 - Flp pilus assembly protein, pilin Flp, at 275,443 to 275,628 GFF2214 GFF2215 - L,D-transpeptidase, at 276,043 to 277,446 GFF2215 GFF2216 - Uncharacterized protein Tbd_1903, at 277,524 to 278,645 GFF2216 GFF2217 - Transcriptional regulator, LysR family, at 278,785 to 279,747 GFF2217 GFF2218 - FIG00455441: hypothetical protein, at 279,870 to 280,391 GFF2218
Locus Name Description Strand Phenotype
GFF2208 Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily - insig.
GFF2209 hypothetical protein - no data
GFF2210 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly - insig.
GFF2211 Flp pilus assembly protein RcpC/CpaB - insig.
GFF2212 KEGG: prepilin peptidase CpaA - insig.
GFF2213 Flp pilus assembly protein, pilin Flp - insig.
GFF2214 Flp pilus assembly protein, pilin Flp - insig.
GFF2215 L,D-transpeptidase - insig.
GFF2216 Uncharacterized protein Tbd_1903 - insig.
GFF2217 Transcriptional regulator, LysR family + insig.
GFF2218 FIG00455441: hypothetical protein + insig.

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