Gene info for GFF2200 in Variovorax sp. SCN45

Annotation: sigma-54-dependent transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 261,665 to 263,089
See nucleotide sequence around GFF2200 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2195 and GFF2196 are separated by 198 nucleotidesGFF2196 and GFF2197 are separated by 24 nucleotidesGFF2197 and GFF2198 are separated by 28 nucleotidesGFF2198 and GFF2199 are separated by 11 nucleotidesGFF2199 and GFF2200 are separated by 26 nucleotidesGFF2200 and GFF2201 are separated by 39 nucleotidesGFF2201 and GFF2202 are separated by 61 nucleotidesGFF2202 and GFF2203 overlap by 4 nucleotidesGFF2203 and GFF2204 are separated by 34 nucleotidesGFF2204 and GFF2205 are separated by 146 nucleotides GFF2195 - FIG00732904: hypothetical protein, at 253,431 to 256,526 GFF2195 GFF2196 - no description, at 256,725 to 256,871 GFF2196 GFF2197 - Type I secretion system ATPase, LssB family LapB, at 256,896 to 258,713 GFF2197 GFF2198 - Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC, at 258,742 to 260,058 GFF2198 GFF2199 - Type I secretion outer membrane protein, TolC family, at 260,070 to 261,638 GFF2199 GFF2200 - sigma-54-dependent transcriptional regulator, at 261,665 to 263,089 GFF2200 GFF2201 - hypothetical protein, at 263,129 to 265,156 GFF2201 GFF2202 - hypothetical protein, at 265,218 to 265,712 GFF2202 GFF2203 - no description, at 265,709 to 266,182 GFF2203 GFF2204 - no description, at 266,217 to 266,450 GFF2204 GFF2205 - hypothetical protein, at 266,597 to 267,580 GFF2205
Locus Name Description Strand Phenotype
GFF2195 FIG00732904: hypothetical protein + insig.
GFF2196 no description - insig.
GFF2197 Type I secretion system ATPase, LssB family LapB + insig.
GFF2198 Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC + insig.
GFF2199 Type I secretion outer membrane protein, TolC family + insig.
GFF2200 sigma-54-dependent transcriptional regulator - insig.
GFF2201 hypothetical protein - sig.
GFF2202 hypothetical protein - insig.
GFF2203 no description - insig.
GFF2204 no description - insig.
GFF2205 hypothetical protein - insig.

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