Gene info for GFF220 in Variovorax sp. SCN45

Annotation: tRNA pseudouridine(55) synthase (EC 5.4.99.25)
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, - strand, nucleotides 244,914 to 245,879
See nucleotide sequence around GFF220 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF215 and GFF216 are separated by 13 nucleotidesGFF216 and GFF217 are separated by 86 nucleotidesGFF217 and GFF218 are separated by 120 nucleotidesGFF218 and GFF219 are separated by 122 nucleotidesGFF219 and GFF220 overlap by 4 nucleotidesGFF220 and GFF221 are separated by 2 nucleotidesGFF221 and GFF222 are separated by 21 nucleotidesGFF222 and GFF223 are separated by 24 nucleotidesGFF223 and GFF224 are separated by 15 nucleotidesGFF224 and GFF225 are separated by 189 nucleotides GFF215 - RNA polymerase sigma-54 factor RpoN, at 239,510 to 240,025 GFF215 GFF216 - Transmembrane regulator protein PrtR, at 240,039 to 240,863 GFF216 GFF217 - Orf21; putative lipoprotein, at 240,950 to 241,333 GFF217 GFF218 - hypothetical protein, at 241,454 to 242,956 GFF218 GFF219 - GTP-binding protein TypA/BipA, at 243,079 to 244,917 GFF219 GFF220 - tRNA pseudouridine(55) synthase (EC 5.4.99.25), at 244,914 to 245,879 GFF220 GFF221 - Ribosome-binding factor A, at 245,882 to 246,253 GFF221 GFF222 - Translation initiation factor 2, at 246,275 to 249,256 GFF222 GFF223 - Transcription termination protein NusA, at 249,281 to 250,774 GFF223 GFF224 - Bacterial ribosome SSU maturation protein RimP, at 250,790 to 251,449 GFF224 GFF225 - Permeases of the major facilitator superfamily, at 251,639 to 252,835 GFF225
Locus Name Description Strand Phenotype
GFF215 RNA polymerase sigma-54 factor RpoN + insig.
GFF216 Transmembrane regulator protein PrtR + insig.
GFF217 Orf21; putative lipoprotein + insig.
GFF218 hypothetical protein + insig.
GFF219 GTP-binding protein TypA/BipA - cofit
GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) - insig.
GFF221 Ribosome-binding factor A - no data
GFF222 Translation initiation factor 2 - no data
GFF223 Transcription termination protein NusA - no data
GFF224 Bacterial ribosome SSU maturation protein RimP - no data
GFF225 Permeases of the major facilitator superfamily - insig.

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