Gene info for GFF2189 in Variovorax sp. SCN45

Annotation: Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 245,407 to 246,015
See nucleotide sequence around GFF2189 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2184 and GFF2185 are separated by 25 nucleotidesGFF2185 and GFF2186 are separated by 34 nucleotidesGFF2186 and GFF2187 are separated by 4 nucleotidesGFF2187 and GFF2188 are separated by 160 nucleotidesGFF2188 and GFF2189 are separated by 68 nucleotidesGFF2189 and GFF2190 are separated by 17 nucleotidesGFF2190 and GFF2191 are separated by 104 nucleotidesGFF2191 and GFF2192 are separated by 0 nucleotidesGFF2192 and GFF2193 are separated by 300 nucleotidesGFF2193 and GFF2194 are separated by 84 nucleotides GFF2184 - VWA containing CoxE family protein, at 241,546 to 242,733 GFF2184 GFF2185 - Acetyltransferase, GNAT family, at 242,759 to 243,346 GFF2185 GFF2186 - no description, at 243,381 to 243,626 GFF2186 GFF2187 - ATPase associated with various cellular activities, AAA_5, at 243,631 to 244,485 GFF2187 GFF2188 - Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-), at 244,646 to 245,338 GFF2188 GFF2189 - Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3), at 245,407 to 246,015 GFF2189 GFF2190 - Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3), at 246,033 to 246,758 GFF2190 GFF2191 - Pca operon transcriptional activator PcaQ, at 246,863 to 247,864 GFF2191 GFF2192 - FIG00932626: hypothetical protein, at 247,865 to 248,299 GFF2192 GFF2193 - PE_PGRS, at 248,600 to 252,736 GFF2193 GFF2194 - Tol-Pal system peptidoglycan-associated lipoprotein PAL, at 252,821 to 253,324 GFF2194
Locus Name Description Strand Phenotype
GFF2184 VWA containing CoxE family protein - insig.
GFF2185 Acetyltransferase, GNAT family - insig.
GFF2186 no description - insig.
GFF2187 ATPase associated with various cellular activities, AAA_5 - insig.
GFF2188 Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-) + insig.
GFF2189 Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3) - cofit
GFF2190 Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3) - cofit
GFF2191 Pca operon transcriptional activator PcaQ + insig.
GFF2192 FIG00932626: hypothetical protein - cofit
GFF2193 PE_PGRS + insig.
GFF2194 Tol-Pal system peptidoglycan-associated lipoprotein PAL + insig.

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