Gene info for GFF2168 in Variovorax sp. SCN45

Annotation: High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 221,912 to 222,835
See nucleotide sequence around GFF2168 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2163 and GFF2164 are separated by 158 nucleotidesGFF2164 and GFF2165 are separated by 140 nucleotidesGFF2165 and GFF2166 are separated by 63 nucleotidesGFF2166 and GFF2167 are separated by 55 nucleotidesGFF2167 and GFF2168 are separated by 31 nucleotidesGFF2168 and GFF2169 overlap by 4 nucleotidesGFF2169 and GFF2170 are separated by 20 nucleotidesGFF2170 and GFF2171 are separated by 34 nucleotidesGFF2171 and GFF2172 are separated by 73 nucleotidesGFF2172 and GFF2173 are separated by 12 nucleotides GFF2163 - hypothetical protein, at 215,792 to 216,883 GFF2163 GFF2164 - Transcriptional regulator, IclR family, at 217,042 to 217,884 GFF2164 GFF2165 - Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, at 218,025 to 219,785 GFF2165 GFF2166 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 219,849 to 220,625 GFF2166 GFF2167 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 220,681 to 221,880 GFF2167 GFF2168 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 221,912 to 222,835 GFF2168 GFF2169 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 222,832 to 224,622 GFF2169 GFF2170 - Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1), at 224,643 to 225,353 GFF2170 GFF2171 - MBL-fold metallohydrolase SPO0683, at 225,388 to 226,356 GFF2171 GFF2172 - Permease of the drug/metabolite transporter (DMT) superfamily, at 226,430 to 227,302 GFF2172 GFF2173 - no description, at 227,315 to 228,502 GFF2173
Locus Name Description Strand Phenotype
GFF2163 hypothetical protein - insig.
GFF2164 Transcriptional regulator, IclR family - strong
GFF2165 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + insig.
GFF2166 Oxidoreductase, short-chain dehydrogenase/reductase family + no data
GFF2167 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2168 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) + insig.
GFF2169 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) + insig.
GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) + insig.
GFF2171 MBL-fold metallohydrolase SPO0683 + insig.
GFF2172 Permease of the drug/metabolite transporter (DMT) superfamily + insig.
GFF2173 no description + insig.

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