Gene info for GFF2149 in Variovorax sp. SCN45

Annotation: Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 197,974 to 198,936
See nucleotide sequence around GFF2149 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2144 and GFF2145 are separated by 16 nucleotidesGFF2145 and GFF2146 are separated by 16 nucleotidesGFF2146 and GFF2147 are separated by 90 nucleotidesGFF2147 and GFF2148 are separated by 3 nucleotidesGFF2148 and GFF2149 overlap by 1 nucleotidesGFF2149 and GFF2150 are separated by 129 nucleotidesGFF2150 and GFF2151 are separated by 84 nucleotidesGFF2151 and GFF2152 overlap by 1 nucleotidesGFF2152 and GFF2153 are separated by 19 nucleotidesGFF2153 and GFF2154 are separated by 42 nucleotides GFF2144 - tRNA-dihydrouridine synthase DusB, at 193,146 to 194,207 GFF2144 GFF2145 - DNA-binding protein Fis, at 194,224 to 194,460 GFF2145 GFF2146 - IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3), at 194,477 to 196,084 GFF2146 GFF2147 - no description, at 196,175 to 196,690 GFF2147 GFF2148 - Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8), at 196,694 to 197,974 GFF2148 GFF2149 - Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7), at 197,974 to 198,936 GFF2149 GFF2150 - Rubredoxin, at 199,066 to 199,218 GFF2150 GFF2151 - twitching motility protein PilG, at 199,303 to 199,701 GFF2151 GFF2152 - twitching motility protein PilH, at 199,701 to 200,066 GFF2152 GFF2153 - type IV pili signal transduction protein PilI, at 200,086 to 200,619 GFF2153 GFF2154 - twitching motility protein PilJ, at 200,662 to 202,968 GFF2154
Locus Name Description Strand Phenotype
GFF2144 tRNA-dihydrouridine synthase DusB + cofit
GFF2145 DNA-binding protein Fis + no data
GFF2146 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) + no data
GFF2147 no description - insig.
GFF2148 Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8) - no data
GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) - insig.
GFF2150 Rubredoxin + no data
GFF2151 twitching motility protein PilG + strong
GFF2152 twitching motility protein PilH + cofit
GFF2153 type IV pili signal transduction protein PilI + cofit
GFF2154 twitching motility protein PilJ + strong

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