Gene info for GFF2139 in Variovorax sp. SCN45

Annotation: Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 187,706 to 189,334
See nucleotide sequence around GFF2139 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2134 and GFF2135 are separated by 22 nucleotidesGFF2135 and GFF2136 overlap by 4 nucleotidesGFF2136 and GFF2137 overlap by 4 nucleotidesGFF2137 and GFF2138 are separated by 36 nucleotidesGFF2138 and GFF2139 overlap by 4 nucleotidesGFF2139 and GFF2140 are separated by 52 nucleotidesGFF2140 and GFF2141 are separated by 208 nucleotidesGFF2141 and GFF2142 are separated by 172 nucleotidesGFF2142 and GFF2143 are separated by 21 nucleotidesGFF2143 and GFF2144 are separated by 172 nucleotides GFF2134 - probable iron-sulfur binding protein YPO1417, at 183,331 to 184,212 GFF2134 GFF2135 - D-ribose pyranase (EC 5.4.99.62), at 184,235 to 184,627 GFF2135 GFF2136 - Ribokinase (EC 2.7.1.15), at 184,624 to 185,589 GFF2136 GFF2137 - Ribose operon repressor, at 185,586 to 186,683 GFF2137 GFF2138 - Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1), at 186,720 to 187,709 GFF2138 GFF2139 - Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1), at 187,706 to 189,334 GFF2139 GFF2140 - Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1), at 189,387 to 190,340 GFF2140 GFF2141 - GTP-binding and nucleic acid-binding protein YchF, at 190,549 to 191,640 GFF2141 GFF2142 - Glutathione S-transferase (EC 2.5.1.18), at 191,813 to 192,487 GFF2142 GFF2143 - probable membrane protein YPO3302, at 192,509 to 192,973 GFF2143 GFF2144 - tRNA-dihydrouridine synthase DusB, at 193,146 to 194,207 GFF2144
Locus Name Description Strand Phenotype
GFF2134 probable iron-sulfur binding protein YPO1417 + insig.
GFF2135 D-ribose pyranase (EC 5.4.99.62) - no data
GFF2136 Ribokinase (EC 2.7.1.15) - cofit
GFF2137 Ribose operon repressor - strong
GFF2138 Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) - insig.
GFF2139 Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) - insig.
GFF2140 Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1) - insig.
GFF2141 GTP-binding and nucleic acid-binding protein YchF + strong
GFF2142 Glutathione S-transferase (EC 2.5.1.18) + insig.
GFF2143 probable membrane protein YPO3302 - insig.
GFF2144 tRNA-dihydrouridine synthase DusB + cofit

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