Gene info for GFF213 in Variovorax sp. SCN45

Annotation: tmRNA-binding protein SmpB
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, + strand, nucleotides 238,538 to 239,014
See nucleotide sequence around GFF213 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF208 and GFF209 are separated by 77 nucleotidesGFF209 and GFF210 are separated by 128 nucleotidesGFF210 and GFF211 are separated by 19 nucleotidesGFF211 and GFF212 overlap by 1 nucleotidesGFF212 and GFF213 are separated by 63 nucleotidesGFF213 and GFF214 are separated by 99 nucleotidesGFF214 and GFF215 are separated by 15 nucleotidesGFF215 and GFF216 are separated by 13 nucleotidesGFF216 and GFF217 are separated by 86 nucleotidesGFF217 and GFF218 are separated by 120 nucleotides GFF208 - Prevent host death protein, Phd antitoxin, at 235,216 to 235,464 GFF208 GFF209 - Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain, at 235,542 to 237,011 GFF209 GFF210 - Putative transmembrane protein, at 237,140 to 237,673 GFF210 GFF211 - protein of unknown function UPF0125, at 237,693 to 238,028 GFF211 GFF212 - Ribosome association toxin RatA, at 238,028 to 238,474 GFF212 GFF213 - tmRNA-binding protein SmpB, at 238,538 to 239,014 GFF213 GFF214 - Putative transmembrane protein, at 239,114 to 239,494 GFF214 GFF215 - RNA polymerase sigma-54 factor RpoN, at 239,510 to 240,025 GFF215 GFF216 - Transmembrane regulator protein PrtR, at 240,039 to 240,863 GFF216 GFF217 - Orf21; putative lipoprotein, at 240,950 to 241,333 GFF217 GFF218 - hypothetical protein, at 241,454 to 242,956 GFF218
Locus Name Description Strand Phenotype
GFF208 Prevent host death protein, Phd antitoxin - no data
GFF209 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain - no data
GFF210 Putative transmembrane protein + insig.
GFF211 protein of unknown function UPF0125 - insig.
GFF212 Ribosome association toxin RatA - cofit
GFF213 tmRNA-binding protein SmpB + cofit
GFF214 Putative transmembrane protein + insig.
GFF215 RNA polymerase sigma-54 factor RpoN + insig.
GFF216 Transmembrane regulator protein PrtR + insig.
GFF217 Orf21; putative lipoprotein + insig.
GFF218 hypothetical protein + insig.

Or browse nearby genes

Or see the comparative fitness browser