Gene info for GFF2121 in Variovorax sp. SCN45

Annotation: Type IV fimbrial biogenesis protein PilY1
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 169,825 to 173,256
See nucleotide sequence around GFF2121 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2116 and GFF2117 are separated by 223 nucleotidesGFF2117 and GFF2118 overlap by 4 nucleotidesGFF2118 and GFF2119 overlap by 4 nucleotidesGFF2119 and GFF2120 overlap by 4 nucleotidesGFF2120 and GFF2121 are separated by 25 nucleotidesGFF2121 and GFF2122 are separated by 5 nucleotidesGFF2122 and GFF2123 are separated by 27 nucleotidesGFF2123 and GFF2124 are separated by 36 nucleotidesGFF2124 and GFF2125 are separated by 128 nucleotidesGFF2125 and GFF2126 are separated by 321 nucleotides GFF2116 - Cytochrome P450, at 165,737 to 167,131 GFF2116 GFF2117 - KEGG: type IV fimbrial biogenesis protein FimT, at 167,355 to 167,906 GFF2117 GFF2118 - hypothetical protein, at 167,903 to 168,460 GFF2118 GFF2119 - Type IV fimbrial biogenesis protein PilW, at 168,457 to 169,221 GFF2119 GFF2120 - Type IV fimbrial biogenesis protein PilX, at 169,218 to 169,799 GFF2120 GFF2121 - Type IV fimbrial biogenesis protein PilY1, at 169,825 to 173,256 GFF2121 GFF2122 - Type IV pilus biogenesis protein PilE, at 173,262 to 173,714 GFF2122 GFF2123 - Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II, at 173,742 to 174,218 GFF2123 GFF2124 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center, at 174,255 to 174,872 GFF2124 GFF2125 - hypothetical protein, at 175,001 to 175,351 GFF2125 GFF2126 - hypothetical protein, at 175,673 to 176,338 GFF2126
Locus Name Description Strand Phenotype
GFF2116 Cytochrome P450 + cofit
GFF2117 KEGG: type IV fimbrial biogenesis protein FimT + insig.
GFF2118 hypothetical protein + insig.
GFF2119 Type IV fimbrial biogenesis protein PilW + insig.
GFF2120 Type IV fimbrial biogenesis protein PilX + insig.
GFF2121 Type IV fimbrial biogenesis protein PilY1 + insig.
GFF2122 Type IV pilus biogenesis protein PilE + insig.
GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II - insig.
GFF2124 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center - insig.
GFF2125 hypothetical protein - insig.
GFF2126 hypothetical protein + no data

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