Gene info for GFF2120 in Variovorax sp. SCN45

Annotation: Type IV fimbrial biogenesis protein PilX
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 169,218 to 169,799
See nucleotide sequence around GFF2120 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2115 and GFF2116 are separated by 244 nucleotidesGFF2116 and GFF2117 are separated by 223 nucleotidesGFF2117 and GFF2118 overlap by 4 nucleotidesGFF2118 and GFF2119 overlap by 4 nucleotidesGFF2119 and GFF2120 overlap by 4 nucleotidesGFF2120 and GFF2121 are separated by 25 nucleotidesGFF2121 and GFF2122 are separated by 5 nucleotidesGFF2122 and GFF2123 are separated by 27 nucleotidesGFF2123 and GFF2124 are separated by 36 nucleotidesGFF2124 and GFF2125 are separated by 128 nucleotides GFF2115 - transcriptional regulator, AraC family, at 164,680 to 165,492 GFF2115 GFF2116 - Cytochrome P450, at 165,737 to 167,131 GFF2116 GFF2117 - KEGG: type IV fimbrial biogenesis protein FimT, at 167,355 to 167,906 GFF2117 GFF2118 - hypothetical protein, at 167,903 to 168,460 GFF2118 GFF2119 - Type IV fimbrial biogenesis protein PilW, at 168,457 to 169,221 GFF2119 GFF2120 - Type IV fimbrial biogenesis protein PilX, at 169,218 to 169,799 GFF2120 GFF2121 - Type IV fimbrial biogenesis protein PilY1, at 169,825 to 173,256 GFF2121 GFF2122 - Type IV pilus biogenesis protein PilE, at 173,262 to 173,714 GFF2122 GFF2123 - Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II, at 173,742 to 174,218 GFF2123 GFF2124 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center, at 174,255 to 174,872 GFF2124 GFF2125 - hypothetical protein, at 175,001 to 175,351 GFF2125
Locus Name Description Strand Phenotype
GFF2115 transcriptional regulator, AraC family - no data
GFF2116 Cytochrome P450 + cofit
GFF2117 KEGG: type IV fimbrial biogenesis protein FimT + insig.
GFF2118 hypothetical protein + insig.
GFF2119 Type IV fimbrial biogenesis protein PilW + insig.
GFF2120 Type IV fimbrial biogenesis protein PilX + insig.
GFF2121 Type IV fimbrial biogenesis protein PilY1 + insig.
GFF2122 Type IV pilus biogenesis protein PilE + insig.
GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II - insig.
GFF2124 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center - insig.
GFF2125 hypothetical protein - insig.

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