Gene info for GFF2080 in Pseudomonas sp. DMC3

Annotation: tRNA pseudouridine synthase D
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 329,607 to 330,665
See nucleotide sequence around GFF2080 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2075 and GFF2076 are separated by 143 nucleotidesGFF2076 and GFF2077 are separated by 116 nucleotidesGFF2077 and GFF2078 are separated by 88 nucleotidesGFF2078 and GFF2079 are separated by 43 nucleotidesGFF2079 and GFF2080 overlap by 4 nucleotidesGFF2080 and GFF2081 overlap by 13 nucleotidesGFF2081 and GFF2082 overlap by 1 nucleotidesGFF2082 and GFF2083 are separated by 210 nucleotidesGFF2083 and GFF2084 are separated by 106 nucleotidesGFF2084 and GFF2085 are separated by 532 nucleotides GFF2075 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 325,183 to 325,890 GFF2075 GFF2076 - HTH-type transcriptional regulator DmlR, at 326,034 to 326,930 GFF2076 GFF2077 - S-(hydroxymethyl)glutathione dehydrogenase, at 327,047 to 328,159 GFF2077 GFF2078 - S-formylglutathione hydrolase YeiG, at 328,248 to 329,093 GFF2078 GFF2079 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 329,137 to 329,610 GFF2079 GFF2080 - tRNA pseudouridine synthase D, at 329,607 to 330,665 GFF2080 GFF2081 - 5'-nucleotidase SurE, at 330,653 to 331,402 GFF2081 GFF2082 - Protein-L-isoaspartate O-methyltransferase, at 331,402 to 332,076 GFF2082 GFF2083 - Murein hydrolase activator NlpD, at 332,287 to 333,156 GFF2083 GFF2084 - RNA polymerase sigma factor RpoS, at 333,263 to 334,270 GFF2084 GFF2085 - Ferredoxin 1, at 334,803 to 335,126 GFF2085
Locus Name Description Strand Phenotype
GFF2075 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase + no data
GFF2076 HTH-type transcriptional regulator DmlR - insig.
GFF2077 S-(hydroxymethyl)glutathione dehydrogenase + insig.
GFF2078 S-formylglutathione hydrolase YeiG + insig.
GFF2079 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase + no data
GFF2080 tRNA pseudouridine synthase D + insig.
GFF2081 5'-nucleotidase SurE + insig.
GFF2082 Protein-L-isoaspartate O-methyltransferase + cofit
GFF2083 Murein hydrolase activator NlpD + no data
GFF2084 RNA polymerase sigma factor RpoS + strong
GFF2085 Ferredoxin 1 - no data

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