Gene info for GFF2024 in Sphingobium sp. HT1-2

Annotation: Rhamnogalacturonan endolyase (EC 4.2.2.23)
Type 1: Protein-coding gene
Located on scaffold 165695.215, + strand, nucleotides 2,050,528 to 2,052,447
See nucleotide sequence around GFF2024 or for all of scaffold 165695.215

Nearby Genes

500 ntGFF2019 and GFF2020 overlap by 4 nucleotidesGFF2020 and GFF2021 are separated by 3 nucleotidesGFF2021 and GFF2022 are separated by 262 nucleotidesGFF2022 and GFF2023 are separated by 534 nucleotidesGFF2023 and GFF2024 are separated by 146 nucleotidesGFF2024 and GFF2025 are separated by 147 nucleotidesGFF2025 and GFF2026 are separated by 237 nucleotidesGFF2026 and GFF2027 are separated by 0 nucleotidesGFF2027 and GFF2028 are separated by 3 nucleotidesGFF2028 and GFF2029 are separated by 88 nucleotides GFF2019 - hypothetical protein, at 2,043,899 to 2,044,660 GFF2019 GFF2020 - ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD, at 2,044,657 to 2,045,379 GFF2020 GFF2021 - Ku domain protein, at 2,045,383 to 2,046,243 GFF2021 GFF2022 - hypothetical protein, at 2,046,506 to 2,046,718 GFF2022 GFF2023 - TonB-dependent receptor, at 2,047,253 to 2,050,381 GFF2023 GFF2024 - Rhamnogalacturonan endolyase (EC 4.2.2.23), at 2,050,528 to 2,052,447 GFF2024 GFF2025 - beta-galactosidase (EC 3.2.1.23), at 2,052,595 to 2,055,690 GFF2025 GFF2026 - Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site, at 2,055,928 to 2,057,553 GFF2026 GFF2027 - hypothetical protein, at 2,057,554 to 2,058,318 GFF2027 GFF2028 - hypothetical protein, at 2,058,322 to 2,058,843 GFF2028 GFF2029 - Oxidoreductase, at 2,058,932 to 2,059,954 GFF2029
Locus Name Description Strand Phenotype
GFF2019 hypothetical protein - cofit
GFF2020 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD - cofit
GFF2021 Ku domain protein - cofit
GFF2022 hypothetical protein + cofit
GFF2023 TonB-dependent receptor - cofit
GFF2024 Rhamnogalacturonan endolyase (EC 4.2.2.23) + cofit
GFF2025 beta-galactosidase (EC 3.2.1.23) + cofit
GFF2026 Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site - insig.
GFF2027 hypothetical protein - cofit
GFF2028 hypothetical protein - cofit
GFF2029 Oxidoreductase - cofit

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