Gene info for GFF2005 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, AraC family
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, - strand, nucleotides 48,463 to 49,491
See nucleotide sequence around GFF2005 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF2000 and GFF2001 are separated by 32 nucleotidesGFF2001 and GFF2002 are separated by 54 nucleotidesGFF2002 and GFF2003 are separated by 101 nucleotidesGFF2003 and GFF2004 overlap by 4 nucleotidesGFF2004 and GFF2005 overlap by 4 nucleotidesGFF2005 and GFF2006 are separated by 140 nucleotidesGFF2006 and GFF2007 are separated by 143 nucleotidesGFF2007 and GFF2008 overlap by 4 nucleotidesGFF2008 and GFF2009 are separated by 21 nucleotidesGFF2009 and GFF2010 are separated by 16 nucleotides GFF2000 - Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17), at 43,922 to 45,805 GFF2000 GFF2001 - Putative phosphatase YieH, at 45,838 to 46,530 GFF2001 GFF2002 - Thioredoxin related protein PA2694, at 46,585 to 46,911 GFF2002 GFF2003 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 47,013 to 48,014 GFF2003 GFF2004 - no description, at 48,011 to 48,466 GFF2004 GFF2005 - Transcriptional regulator, AraC family, at 48,463 to 49,491 GFF2005 GFF2006 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4), at 49,632 to 50,804 GFF2006 GFF2007 - Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16), at 50,948 to 52,627 GFF2007 GFF2008 - Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4), at 52,624 to 54,252 GFF2008 GFF2009 - Dienelactone hydrolase and related enzymes, at 54,274 to 55,140 GFF2009 GFF2010 - Methylglutaconyl-CoA hydratase (EC 4.2.1.18), at 55,157 to 55,963 GFF2010
Locus Name Description Strand Phenotype
GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) + strong
GFF2001 Putative phosphatase YieH + insig.
GFF2002 Thioredoxin related protein PA2694 + insig.
GFF2003 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) + insig.
GFF2004 no description + insig.
GFF2005 Transcriptional regulator, AraC family - insig.
GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) + cofit
GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) + insig.
GFF2008 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) + cofit
GFF2009 Dienelactone hydrolase and related enzymes + insig.
GFF2010 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) + sig.

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