Gene info for GFF2003 in Variovorax sp. SCN45

Annotation: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Type 1: Protein-coding gene
Located on scaffold scaffold00000004, + strand, nucleotides 47,013 to 48,014
See nucleotide sequence around GFF2003 or for all of scaffold scaffold00000004

Nearby Genes

500 ntGFF1998 and GFF1999 are separated by 55 nucleotidesGFF1999 and GFF2000 are separated by 223 nucleotidesGFF2000 and GFF2001 are separated by 32 nucleotidesGFF2001 and GFF2002 are separated by 54 nucleotidesGFF2002 and GFF2003 are separated by 101 nucleotidesGFF2003 and GFF2004 overlap by 4 nucleotidesGFF2004 and GFF2005 overlap by 4 nucleotidesGFF2005 and GFF2006 are separated by 140 nucleotidesGFF2006 and GFF2007 are separated by 143 nucleotidesGFF2007 and GFF2008 overlap by 4 nucleotides GFF1998 - Two-component system sensor histidine kinase, at 41,421 to 43,208 GFF1998 GFF1999 - GTG start codon, at 43,264 to 43,698 GFF1999 GFF2000 - Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17), at 43,922 to 45,805 GFF2000 GFF2001 - Putative phosphatase YieH, at 45,838 to 46,530 GFF2001 GFF2002 - Thioredoxin related protein PA2694, at 46,585 to 46,911 GFF2002 GFF2003 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 47,013 to 48,014 GFF2003 GFF2004 - no description, at 48,011 to 48,466 GFF2004 GFF2005 - Transcriptional regulator, AraC family, at 48,463 to 49,491 GFF2005 GFF2006 - Isovaleryl-CoA dehydrogenase (EC 1.3.8.4), at 49,632 to 50,804 GFF2006 GFF2007 - Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16), at 50,948 to 52,627 GFF2007 GFF2008 - Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4), at 52,624 to 54,252 GFF2008
Locus Name Description Strand Phenotype
GFF1998 Two-component system sensor histidine kinase + insig.
GFF1999 GTG start codon + no data
GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) + strong
GFF2001 Putative phosphatase YieH + insig.
GFF2002 Thioredoxin related protein PA2694 + insig.
GFF2003 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) + insig.
GFF2004 no description + insig.
GFF2005 Transcriptional regulator, AraC family - insig.
GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) + cofit
GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) + insig.
GFF2008 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) + cofit

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