Gene info for GFF1978 in Sphingobium sp. HT1-2

Annotation: Flp pilus assembly protein RcpC/CpaB
Type 1: Protein-coding gene
Located on scaffold 165695.215, + strand, nucleotides 2,000,654 to 2,001,667
See nucleotide sequence around GFF1978 or for all of scaffold 165695.215

Nearby Genes

500 ntGFF1973 and GFF1974 are separated by 38 nucleotidesGFF1974 and GFF1975 are separated by 21 nucleotidesGFF1975 and GFF1976 overlap by 4 nucleotidesGFF1976 and GFF1977 are separated by 49 nucleotidesGFF1977 and GFF1978 are separated by 51 nucleotidesGFF1978 and GFF1979 are separated by 1 nucleotidesGFF1979 and GFF1980 are separated by 16 nucleotidesGFF1980 and GFF1981 are separated by 1 nucleotidesGFF1981 and GFF1982 are separated by 62 nucleotidesGFF1982 and GFF1983 are separated by 18 nucleotides GFF1973 - Ribonuclease HI (EC 3.1.26.4), at 1,997,343 to 1,997,789 GFF1973 GFF1974 - UPF0339 protein YegP.N, at 1,997,828 to 1,998,004 GFF1974 GFF1975 - Glycine/D-amino acid oxidases (deaminating), at 1,998,026 to 1,999,129 GFF1975 GFF1976 - lysophospholipase L2, at 1,999,126 to 2,000,079 GFF1976 GFF1977 - Type IV prepilin peptidase TadV/CpaA, at 2,000,129 to 2,000,602 GFF1977 GFF1978 - Flp pilus assembly protein RcpC/CpaB, at 2,000,654 to 2,001,667 GFF1978 GFF1979 - Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly, at 2,001,669 to 2,003,222 GFF1979 GFF1980 - Flp pilus assembly protein CpaD, at 2,003,239 to 2,003,892 GFF1980 GFF1981 - Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly, at 2,003,894 to 2,005,189 GFF1981 GFF1982 - Flp pilus assembly protein TadB, at 2,005,252 to 2,006,250 GFF1982 GFF1983 - Type II/IV secretion system protein TadC, associated with Flp pilus assembly, at 2,006,269 to 2,007,258 GFF1983
Locus Name Description Strand Phenotype
GFF1973 Ribonuclease HI (EC 3.1.26.4) + cofit
GFF1974 UPF0339 protein YegP.N - cofit
GFF1975 Glycine/D-amino acid oxidases (deaminating) - cofit
GFF1976 lysophospholipase L2 - cofit
GFF1977 Type IV prepilin peptidase TadV/CpaA + cofit
GFF1978 Flp pilus assembly protein RcpC/CpaB + insig.
GFF1979 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly + cofit
GFF1980 Flp pilus assembly protein CpaD + cofit
GFF1981 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly + cofit
GFF1982 Flp pilus assembly protein TadB + insig.
GFF1983 Type II/IV secretion system protein TadC, associated with Flp pilus assembly + cofit

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