Gene info for GFF1977 in Sphingobium sp. HT1-2

Annotation: Type IV prepilin peptidase TadV/CpaA
Type 1: Protein-coding gene
Located on scaffold 165695.215, + strand, nucleotides 2,000,129 to 2,000,602
See nucleotide sequence around GFF1977 or for all of scaffold 165695.215

Nearby Genes

500 ntGFF1972 and GFF1973 overlap by 4 nucleotidesGFF1973 and GFF1974 are separated by 38 nucleotidesGFF1974 and GFF1975 are separated by 21 nucleotidesGFF1975 and GFF1976 overlap by 4 nucleotidesGFF1976 and GFF1977 are separated by 49 nucleotidesGFF1977 and GFF1978 are separated by 51 nucleotidesGFF1978 and GFF1979 are separated by 1 nucleotidesGFF1979 and GFF1980 are separated by 16 nucleotidesGFF1980 and GFF1981 are separated by 1 nucleotidesGFF1981 and GFF1982 are separated by 62 nucleotides GFF1972 - Homoserine kinase (EC 2.7.1.39), at 1,996,369 to 1,997,346 GFF1972 GFF1973 - Ribonuclease HI (EC 3.1.26.4), at 1,997,343 to 1,997,789 GFF1973 GFF1974 - UPF0339 protein YegP.N, at 1,997,828 to 1,998,004 GFF1974 GFF1975 - Glycine/D-amino acid oxidases (deaminating), at 1,998,026 to 1,999,129 GFF1975 GFF1976 - lysophospholipase L2, at 1,999,126 to 2,000,079 GFF1976 GFF1977 - Type IV prepilin peptidase TadV/CpaA, at 2,000,129 to 2,000,602 GFF1977 GFF1978 - Flp pilus assembly protein RcpC/CpaB, at 2,000,654 to 2,001,667 GFF1978 GFF1979 - Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly, at 2,001,669 to 2,003,222 GFF1979 GFF1980 - Flp pilus assembly protein CpaD, at 2,003,239 to 2,003,892 GFF1980 GFF1981 - Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly, at 2,003,894 to 2,005,189 GFF1981 GFF1982 - Flp pilus assembly protein TadB, at 2,005,252 to 2,006,250 GFF1982
Locus Name Description Strand Phenotype
GFF1972 Homoserine kinase (EC 2.7.1.39) + strong
GFF1973 Ribonuclease HI (EC 3.1.26.4) + cofit
GFF1974 UPF0339 protein YegP.N - cofit
GFF1975 Glycine/D-amino acid oxidases (deaminating) - cofit
GFF1976 lysophospholipase L2 - cofit
GFF1977 Type IV prepilin peptidase TadV/CpaA + cofit
GFF1978 Flp pilus assembly protein RcpC/CpaB + insig.
GFF1979 Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly + cofit
GFF1980 Flp pilus assembly protein CpaD + cofit
GFF1981 Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly + cofit
GFF1982 Flp pilus assembly protein TadB + insig.

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