Gene info for GFF1788 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, + strand, nucleotides 449,215 to 449,436
See nucleotide sequence around GFF1788 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1783 and GFF1784 are separated by 10 nucleotidesGFF1784 and GFF1785 are separated by 112 nucleotidesGFF1785 and GFF1786 overlap by 4 nucleotidesGFF1786 and GFF1787 are separated by 8 nucleotidesGFF1787 and GFF1788 are separated by 1047 nucleotidesGFF1788 and GFF1789 are separated by 50 nucleotidesGFF1789 and GFF1790 are separated by 13 nucleotidesGFF1790 and GFF1791 overlap by 1 nucleotidesGFF1791 and GFF1792 are separated by 142 nucleotidesGFF1792 and GFF1793 are separated by 48 nucleotides GFF1783 - Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO, at 444,256 to 445,152 GFF1783 GFF1784 - no description, at 445,163 to 445,852 GFF1784 GFF1785 - Two-component transcriptional response regulator, OmpR family, at 445,965 to 446,654 GFF1785 GFF1786 - hypothetical protein, at 446,651 to 448,003 GFF1786 GFF1787 - no description, at 448,012 to 448,167 GFF1787 GFF1788 - hypothetical protein, at 449,215 to 449,436 GFF1788 GFF1789 - Hydroxymethylpyrimidine ABC transporter, transmembrane component, at 449,487 to 450,257 GFF1789 GFF1790 - Hydroxymethylpyrimidine ABC transporter, ATPase component, at 450,271 to 451,143 GFF1790 GFF1791 - Hydroxymethylpyrimidine ABC transporter, substrate-binding component, at 451,143 to 452,177 GFF1791 GFF1792 - Transcriptional regulator, IclR family, at 452,320 to 453,195 GFF1792 GFF1793 - hypothetical protein, at 453,244 to 454,881 GFF1793
Locus Name Description Strand Phenotype
GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO + insig.
GFF1784 no description - insig.
GFF1785 Two-component transcriptional response regulator, OmpR family + no data
GFF1786 hypothetical protein + insig.
GFF1787 no description + no data
GFF1788 hypothetical protein + cofit
GFF1789 Hydroxymethylpyrimidine ABC transporter, transmembrane component - insig.
GFF1790 Hydroxymethylpyrimidine ABC transporter, ATPase component - insig.
GFF1791 Hydroxymethylpyrimidine ABC transporter, substrate-binding component - insig.
GFF1792 Transcriptional regulator, IclR family - cofit
GFF1793 hypothetical protein + insig.

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