Gene info for GFF1778 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, HxlR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, - strand, nucleotides 439,381 to 439,734
See nucleotide sequence around GFF1778 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1773 and GFF1774 are separated by 128 nucleotidesGFF1774 and GFF1775 overlap by 4 nucleotidesGFF1775 and GFF1776 are separated by 28 nucleotidesGFF1776 and GFF1777 are separated by 24 nucleotidesGFF1777 and GFF1778 are separated by 26 nucleotidesGFF1778 and GFF1779 are separated by 138 nucleotidesGFF1779 and GFF1780 are separated by 11 nucleotidesGFF1780 and GFF1781 are separated by 158 nucleotidesGFF1781 and GFF1782 overlap by 4 nucleotidesGFF1782 and GFF1783 are separated by 99 nucleotides GFF1773 - D-amino acid dehydrogenase (EC 1.4.99.6), at 435,330 to 436,631 GFF1773 GFF1774 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 436,760 to 437,227 GFF1774 GFF1775 - no description, at 437,224 to 437,718 GFF1775 GFF1776 - OsmC-like protein Pfl_1628, at 437,747 to 438,148 GFF1776 GFF1777 - Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily, at 438,173 to 439,354 GFF1777 GFF1778 - Transcriptional regulator, HxlR family, at 439,381 to 439,734 GFF1778 GFF1779 - 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), at 439,873 to 440,745 GFF1779 GFF1780 - hypothetical protein, at 440,757 to 441,890 GFF1780 GFF1781 - Two-component transcriptional response regulator, LuxR family, at 442,049 to 442,732 GFF1781 GFF1782 - integral membrane sensor signal transduction histidine kinase, at 442,729 to 444,156 GFF1782 GFF1783 - Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO, at 444,256 to 445,152 GFF1783
Locus Name Description Strand Phenotype
GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) - strong
GFF1774 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system + cofit
GFF1775 no description + insig.
GFF1776 OsmC-like protein Pfl_1628 + insig.
GFF1777 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily - insig.
GFF1778 Transcriptional regulator, HxlR family - insig.
GFF1779 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) + insig.
GFF1780 hypothetical protein - insig.
GFF1781 Two-component transcriptional response regulator, LuxR family + insig.
GFF1782 integral membrane sensor signal transduction histidine kinase + cofit
GFF1783 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO + insig.

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