Gene info for GFF176 in Variovorax sp. SCN45

Annotation: ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines)
Type 1: Protein-coding gene
Located on scaffold scaffold00000001, + strand, nucleotides 206,960 to 207,619
See nucleotide sequence around GFF176 or for all of scaffold scaffold00000001

Nearby Genes

500 ntGFF171 and GFF172 are separated by 74 nucleotidesGFF172 and GFF173 are separated by 350 nucleotidesGFF173 and GFF174 are separated by 100 nucleotidesGFF174 and GFF175 are separated by 36 nucleotidesGFF175 and GFF176 overlap by 1 nucleotidesGFF176 and GFF177 overlap by 4 nucleotidesGFF177 and GFF178 are separated by 39 nucleotidesGFF178 and GFF179 are separated by 14 nucleotidesGFF179 and GFF180 are separated by 5 nucleotidesGFF180 and GFF181 are separated by 14 nucleotides GFF171 - Histidine kinase, at 201,946 to 202,305 GFF171 GFF172 - hypothetical protein, at 202,380 to 204,242 GFF172 GFF173 - Hexuronate utilization operon transcriptional repressor ExuR, at 204,593 to 205,327 GFF173 GFF174 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 205,428 to 206,258 GFF174 GFF175 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 206,295 to 206,960 GFF175 GFF176 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 206,960 to 207,619 GFF176 GFF177 - Glutamine ABC transporter, ATP-binding protein GlnQ, at 207,616 to 208,386 GFF177 GFF178 - Mannonate dehydratase (EC 4.2.1.8), at 208,426 to 209,637 GFF178 GFF179 - D-mannonate oxidoreductase (EC 1.1.1.57), at 209,652 to 211,154 GFF179 GFF180 - no description, at 211,160 to 211,489 GFF180 GFF181 - Protein of unknown function (DUF1501), at 211,504 to 212,961 GFF181
Locus Name Description Strand Phenotype
GFF171 Histidine kinase + insig.
GFF172 hypothetical protein - insig.
GFF173 Hexuronate utilization operon transcriptional repressor ExuR + insig.
GFF174 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF175 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF176 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) + insig.
GFF177 Glutamine ABC transporter, ATP-binding protein GlnQ + insig.
GFF178 Mannonate dehydratase (EC 4.2.1.8) + insig.
GFF179 D-mannonate oxidoreductase (EC 1.1.1.57) + insig.
GFF180 no description - no data
GFF181 Protein of unknown function (DUF1501) - insig.

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