Gene info for PS417_08810 in Pseudomonas simiae WCS417

Updated annotation (from data): glyoxylate carboligase (EC 4.1.1.47)
Rationale: Specific phenotype: utilization of 2'-Deoxyinosine, Deoxyribonucleic acid, Inosine. (purines are catabolized via urate, allantoin, glyoxylate)
Original annotation: glyoxylate carboligase
Type 1: Protein-coding gene
Located on scaffold CP007637, - strand, nucleotides 1,916,631 to 1,918,406
See nucleotide sequence around PS417_08810 or for all of scaffold CP007637

Other databases: NCBI, IMG: 2586030413, uniprot: A0A1N7TW40

Nearby Genes

500 ntPS417_08785 and PS417_08790 are separated by 130 nucleotidesPS417_08790 and PS417_08795 overlap by 11 nucleotidesPS417_08795 and PS417_08800 are separated by 182 nucleotidesPS417_08800 and PS417_08805 are separated by 165 nucleotidesPS417_08805 and PS417_08810 are separated by 10 nucleotidesPS417_08810 and PS417_08815 are separated by 256 nucleotidesPS417_08815 and PS417_08820 are separated by 134 nucleotidesPS417_08820 and PS417_08825 are separated by 148 nucleotidesPS417_08825 and PS417_08830 are separated by 134 nucleotidesPS417_08830 and PS417_08835 are separated by 50 nucleotides PS417_08785: PS417_08785 - urea transporter, at 1,910,908 to 1,911,783 _08785 PS417_08790: PS417_08790 - pyruvate kinase, at 1,911,914 to 1,913,329 _08790 PS417_08795: PS417_08795 - hydroxypyruvate reductase, at 1,913,319 to 1,914,599 _08795 PS417_08800: PS417_08800 - tartronate semialdehyde reductase, at 1,914,782 to 1,915,672 _08800 PS417_08805: PS417_08805 - hydroxypyruvate isomerase, at 1,915,838 to 1,916,620 _08805 PS417_08810: PS417_08810 - glyoxylate carboligase (EC 4.1.1.47) (from data), at 1,916,631 to 1,918,406 _08810 PS417_08815: PS417_08815 - GlcG protein, at 1,918,663 to 1,919,103 _08815 PS417_08820: PS417_08820 - transposase, at 1,919,238 to 1,919,696 _08820 PS417_08825: PS417_08825 - TetR family transcriptional regulator, at 1,919,845 to 1,920,450 _08825 PS417_08830: PS417_08830 - membrane protein, at 1,920,585 to 1,921,499 _08830 PS417_08835: PS417_08835 - ABC transporter, at 1,921,550 to 1,922,338 _08835
Locus Name Description Strand Phenotype
PS417_08785 PS417_08785 urea transporter - insig.
PS417_08790 PS417_08790 pyruvate kinase - insig.
PS417_08795 PS417_08795 hydroxypyruvate reductase - insig.
PS417_08800 PS417_08800 tartronate semialdehyde reductase - no data
PS417_08805 PS417_08805 hydroxypyruvate isomerase - strong
PS417_08810 PS417_08810 glyoxylate carboligase (EC 4.1.1.47) (from data) - strong
PS417_08815 PS417_08815 GlcG protein + no data
PS417_08820 PS417_08820 transposase - insig.
PS417_08825 PS417_08825 TetR family transcriptional regulator - strong
PS417_08830 PS417_08830 membrane protein + insig.
PS417_08835 PS417_08835 ABC transporter - strong

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