Gene info for GFF1678 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, GntR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, - strand, nucleotides 323,423 to 324,214
See nucleotide sequence around GFF1678 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1673 and GFF1674 overlap by 4 nucleotidesGFF1674 and GFF1675 overlap by 8 nucleotidesGFF1675 and GFF1676 overlap by 4 nucleotidesGFF1676 and GFF1677 are separated by 36 nucleotidesGFF1677 and GFF1678 are separated by 17 nucleotidesGFF1678 and GFF1679 are separated by 123 nucleotidesGFF1679 and GFF1680 are separated by 62 nucleotidesGFF1680 and GFF1681 are separated by 39 nucleotidesGFF1681 and GFF1682 are separated by 1 nucleotidesGFF1682 and GFF1683 overlap by 4 nucleotides GFF1673 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 318,856 to 319,566 GFF1673 GFF1674 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 319,563 to 320,324 GFF1674 GFF1675 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 320,317 to 321,297 GFF1675 GFF1676 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 321,294 to 322,166 GFF1676 GFF1677 - ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate), at 322,203 to 323,405 GFF1677 GFF1678 - Transcriptional regulator, GntR family, at 323,423 to 324,214 GFF1678 GFF1679 - Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9), at 324,338 to 325,042 GFF1679 GFF1680 - KEGG: GntR family transcriptional regulator, at 325,105 to 325,986 GFF1680 GFF1681 - Methylisocitrate lyase (EC 4.1.3.30), at 326,026 to 326,898 GFF1681 GFF1682 - 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33), at 326,900 to 328,300 GFF1682 GFF1683 - 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33), at 328,297 to 328,929 GFF1683
Locus Name Description Strand Phenotype
GFF1673 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF1674 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) - no data
GFF1675 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF1676 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF1677 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) - insig.
GFF1678 Transcriptional regulator, GntR family - cofit
GFF1679 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) - insig.
GFF1680 KEGG: GntR family transcriptional regulator - cofit
GFF1681 Methylisocitrate lyase (EC 4.1.3.30) + insig.
GFF1682 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) + cofit
GFF1683 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) + insig.

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