Gene info for GFF1562 in Variovorax sp. SCN45

Annotation: Transcriptional regulator, LysR family
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, + strand, nucleotides 163,997 to 164,920
See nucleotide sequence around GFF1562 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1557 and GFF1558 are separated by 99 nucleotidesGFF1558 and GFF1559 are separated by 9 nucleotidesGFF1559 and GFF1560 are separated by 186 nucleotidesGFF1560 and GFF1561 are separated by 42 nucleotidesGFF1561 and GFF1562 are separated by 147 nucleotidesGFF1562 and GFF1563 are separated by 165 nucleotidesGFF1563 and GFF1564 are separated by 11 nucleotidesGFF1564 and GFF1565 are separated by 276 nucleotidesGFF1565 and GFF1566 are separated by 551 nucleotidesGFF1566 and GFF1567 are separated by 63 nucleotides GFF1557 - ortholog of Bordetella pertussis (BX470248) BP3300, at 155,537 to 156,514 GFF1557 GFF1558 - Uncharacterized ATP-dependent DNA helicase PA3272, at 156,614 to 160,987 GFF1558 GFF1559 - Mg(2+)-transport-ATPase-associated protein MgtC, at 160,997 to 161,716 GFF1559 GFF1560 - hypothetical protein, at 161,903 to 162,370 GFF1560 GFF1561 - Aldehyde dehydrogenase (EC 1.2.1.3), at 162,413 to 163,849 GFF1561 GFF1562 - Transcriptional regulator, LysR family, at 163,997 to 164,920 GFF1562 GFF1563 - no description, at 165,086 to 165,319 GFF1563 GFF1564 - Prevent host death protein, Phd antitoxin, at 165,331 to 165,465 GFF1564 GFF1565 - hypothetical protein, at 165,742 to 166,905 GFF1565 GFF1566 - no description, at 167,457 to 167,657 GFF1566 GFF1567 - Demethylmenaquinone methyltransferase-like protein, at 167,721 to 168,446 GFF1567
Locus Name Description Strand Phenotype
GFF1557 ortholog of Bordetella pertussis (BX470248) BP3300 + no data
GFF1558 Uncharacterized ATP-dependent DNA helicase PA3272 + insig.
GFF1559 Mg(2+)-transport-ATPase-associated protein MgtC - insig.
GFF1560 hypothetical protein + no data
GFF1561 Aldehyde dehydrogenase (EC 1.2.1.3) - insig.
GFF1562 Transcriptional regulator, LysR family + insig.
GFF1563 no description - insig.
GFF1564 Prevent host death protein, Phd antitoxin - insig.
GFF1565 hypothetical protein + insig.
GFF1566 no description + insig.
GFF1567 Demethylmenaquinone methyltransferase-like protein - sig.

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