Gene info for GFF1538 in Variovorax sp. SCN45

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, - strand, nucleotides 136,573 to 137,265
See nucleotide sequence around GFF1538 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1533 and GFF1534 are separated by 33 nucleotidesGFF1534 and GFF1535 are separated by 115 nucleotidesGFF1535 and GFF1536 overlap by 4 nucleotidesGFF1536 and GFF1537 are separated by 10 nucleotidesGFF1537 and GFF1538 are separated by 3 nucleotidesGFF1538 and GFF1539 are separated by 256 nucleotidesGFF1539 and GFF1540 are separated by 10 nucleotidesGFF1540 and GFF1541 overlap by 11 nucleotidesGFF1541 and GFF1542 are separated by 29 nucleotidesGFF1542 and GFF1543 are separated by 3 nucleotides GFF1533 - no description, at 131,070 to 131,960 GFF1533 GFF1534 - Transcriptional regulator, LysR family, at 131,994 to 132,896 GFF1534 GFF1535 - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25), at 133,012 to 133,917 GFF1535 GFF1536 - BUG/TctC family periplasmic protein, at 133,914 to 134,897 GFF1536 GFF1537 - FIG01127817: hypothetical protein, at 134,908 to 136,569 GFF1537 GFF1538 - hypothetical protein, at 136,573 to 137,265 GFF1538 GFF1539 - RsbT co-antagonist protein RsbRA, at 137,522 to 138,367 GFF1539 GFF1540 - RsbS, negative regulator of sigma-B, at 138,378 to 138,752 GFF1540 GFF1541 - Anti-sigma B factor RsbT, at 138,742 to 139,146 GFF1541 GFF1542 - Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3), at 139,176 to 140,171 GFF1542 GFF1543 - Putative SigmaB asociated two-component system sensor protein, at 140,175 to 141,053 GFF1543
Locus Name Description Strand Phenotype
GFF1533 no description + insig.
GFF1534 Transcriptional regulator, LysR family - insig.
GFF1535 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) + insig.
GFF1536 BUG/TctC family periplasmic protein + insig.
GFF1537 FIG01127817: hypothetical protein + insig.
GFF1538 hypothetical protein - insig.
GFF1539 RsbT co-antagonist protein RsbRA + insig.
GFF1540 RsbS, negative regulator of sigma-B + no data
GFF1541 Anti-sigma B factor RsbT + no data
GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) + insig.
GFF1543 Putative SigmaB asociated two-component system sensor protein + insig.

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