Gene info for GFF1523 in Variovorax sp. SCN45

Annotation: no description
Type 1: Protein-coding gene
Located on scaffold scaffold00000003, - strand, nucleotides 119,482 to 120,495
See nucleotide sequence around GFF1523 or for all of scaffold scaffold00000003

Nearby Genes

500 ntGFF1518 and GFF1519 overlap by 4 nucleotidesGFF1519 and GFF1520 are separated by 158 nucleotidesGFF1520 and GFF1521 are separated by 25 nucleotidesGFF1521 and GFF1522 are separated by 90 nucleotidesGFF1522 and GFF1523 are separated by 58 nucleotidesGFF1523 and GFF1524 overlap by 4 nucleotidesGFF1524 and GFF1525 are separated by 146 nucleotidesGFF1525 and GFF1526 are separated by 82 nucleotidesGFF1526 and GFF1527 are separated by 142 nucleotidesGFF1527 and GFF1528 are separated by 6 nucleotides GFF1518 - 3-dehydroquinate dehydratase II (EC 4.2.1.10), at 113,431 to 113,901 GFF1518 GFF1519 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 113,898 to 114,899 GFF1519 GFF1520 - Transcriptional regulator, IclR family, at 115,058 to 115,840 GFF1520 GFF1521 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 115,866 to 116,885 GFF1521 GFF1522 - Ferrichrome-iron receptor, at 116,976 to 119,423 GFF1522 GFF1523 - KEGG: transmembrane sensor, at 119,482 to 120,495 GFF1523 GFF1524 - FIG006045: Sigma factor, ECF subfamily, at 120,492 to 121,007 GFF1524 GFF1525 - RNA polymerase ECF-type sigma factor, at 121,154 to 121,744 GFF1525 GFF1526 - putative transmembrane sensor, at 121,827 to 122,996 GFF1526 GFF1527 - Ferrichrome-iron receptor, at 123,139 to 125,598 GFF1527 GFF1528 - Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB, at 125,605 to 126,858 GFF1528
Locus Name Description Strand Phenotype
GFF1518 3-dehydroquinate dehydratase II (EC 4.2.1.10) - insig.
GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component - insig.
GFF1520 Transcriptional regulator, IclR family + cofit
GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component + insig.
GFF1522 Ferrichrome-iron receptor - insig.
GFF1523 KEGG: transmembrane sensor - insig.
GFF1524 FIG006045: Sigma factor, ECF subfamily - insig.
GFF1525 RNA polymerase ECF-type sigma factor + insig.
GFF1526 putative transmembrane sensor + insig.
GFF1527 Ferrichrome-iron receptor + insig.
GFF1528 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB + insig.

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