Gene info for GFF1343 in Variovorax sp. SCN45

Annotation: macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides
Type 1: Protein-coding gene
Located on scaffold scaffold00000002, + strand, nucleotides 685,987 to 687,462
See nucleotide sequence around GFF1343 or for all of scaffold scaffold00000002

Nearby Genes

500 ntGFF1338 and GFF1339 are separated by 4 nucleotidesGFF1339 and GFF1340 overlap by 4 nucleotidesGFF1340 and GFF1341 are separated by 1 nucleotidesGFF1341 and GFF1342 are separated by 150 nucleotidesGFF1342 and GFF1343 are separated by 31 nucleotidesGFF1343 and GFF1344 are separated by 46 nucleotidesGFF1344 and GFF1345 are separated by 139 nucleotidesGFF1345 and GFF1346 overlap by 1 nucleotidesGFF1346 and GFF1347 are separated by 15 nucleotidesGFF1347 and GFF1348 are separated by 28 nucleotides GFF1338 - ABC transporter, permease protein 1 RSc1751, at 679,949 to 680,902 GFF1338 GFF1339 - ABC transporter, permease protein 2 RSc1752, at 680,907 to 682,235 GFF1339 GFF1340 - ABC transporter, ATP-binding protein 1 RSc1753, at 682,232 to 683,002 GFF1340 GFF1341 - ABC transporter, ATP-binding protein 2 RSc1754, at 683,004 to 683,699 GFF1341 GFF1342 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 683,850 to 685,955 GFF1342 GFF1343 - macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides, at 685,987 to 687,462 GFF1343 GFF1344 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 687,509 to 688,684 GFF1344 GFF1345 - 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC), at 688,824 to 690,677 GFF1345 GFF1346 - hypothetical protein, at 690,677 to 690,928 GFF1346 GFF1347 - Dabb, at 690,944 to 691,246 GFF1347 GFF1348 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 691,275 to 692,072 GFF1348
Locus Name Description Strand Phenotype
GFF1338 ABC transporter, permease protein 1 RSc1751 + insig.
GFF1339 ABC transporter, permease protein 2 RSc1752 + insig.
GFF1340 ABC transporter, ATP-binding protein 1 RSc1753 + insig.
GFF1341 ABC transporter, ATP-binding protein 2 RSc1754 + insig.
GFF1342 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) + insig.
GFF1343 macromolecule metabolism; macromolecule degradation; degradation of proteins, peptides, glycopeptides + insig.
GFF1344 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) + insig.
GFF1345 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) + insig.
GFF1346 hypothetical protein + cofit
GFF1347 Dabb + insig.
GFF1348 Oxidoreductase, short-chain dehydrogenase/reductase family + insig.

Or browse nearby genes

Or see the comparative fitness browser