Gene info for GFF115 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
Type 1: Protein-coding gene
Located on scaffold scaffold4.1, - strand, nucleotides 124,287 to 127,127
See nucleotide sequence around GFF115 or for all of scaffold scaffold4.1

Nearby Genes

500 ntGFF110 and GFF111 are separated by 143 nucleotidesGFF111 and GFF112 are separated by 8 nucleotidesGFF112 and GFF113 are separated by 1 nucleotidesGFF113 and GFF114 overlap by 1 nucleotidesGFF114 and GFF115 are separated by 46 nucleotidesGFF115 and GFF116 are separated by 137 nucleotidesGFF116 and GFF117 are separated by 4 nucleotidesGFF117 and GFF118 overlap by 4 nucleotidesGFF118 and GFF119 overlap by 1 nucleotidesGFF119 and GFF120 are separated by 102 nucleotides GFF110 - Hypothetical YciO protein, TsaC/YrdC paralog, at 118,345 to 118,980 GFF110 GFF111 - ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD, at 119,124 to 121,628 GFF111 GFF112 - Ku domain protein, at 121,637 to 122,470 GFF112 GFF113 - Membrane protein, putative, at 122,472 to 123,383 GFF113 GFF114 - COG0613, Predicted metal-dependent phosphoesterases (PHP family), at 123,383 to 124,240 GFF114 GFF115 - Phosphoenolpyruvate carboxylase (EC 4.1.1.31), at 124,287 to 127,127 GFF115 GFF116 - Porphobilinogen deaminase (EC 2.5.1.61), at 127,265 to 128,221 GFF116 GFF117 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 128,226 to 129,086 GFF117 GFF118 - Homolog of E. coli HemX protein, at 129,083 to 130,261 GFF118 GFF119 - Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives), at 130,261 to 131,565 GFF119 GFF120 - Ribonuclease E (EC 3.1.26.12), at 131,668 to 134,763 GFF120
Locus Name Description Strand Phenotype
GFF110 Hypothetical YciO protein, TsaC/YrdC paralog - insig.
GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD + insig.
GFF112 Ku domain protein + insig.
GFF113 Membrane protein, putative - insig.
GFF114 COG0613, Predicted metal-dependent phosphoesterases (PHP family) - cofit
GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) - strong
GFF116 Porphobilinogen deaminase (EC 2.5.1.61) + no data
GFF117 Uroporphyrinogen-III synthase (EC 4.2.1.75) + no data
GFF118 Homolog of E. coli HemX protein + no data
GFF119 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) + cofit
GFF120 Ribonuclease E (EC 3.1.26.12) - cofit

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