Gene info for GFF1120 in Variovorax sp. SCN45

Annotation: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Type 1: Protein-coding gene
Located on scaffold scaffold00000002, + strand, nucleotides 436,686 to 437,141
See nucleotide sequence around GFF1120 or for all of scaffold scaffold00000002

Nearby Genes

500 ntGFF1115 and GFF1116 are separated by 17 nucleotidesGFF1116 and GFF1118 overlap by 4 nucleotidesGFF1118 and GFF1117 overlap by 2 nucleotidesGFF1117 and GFF1119 are separated by 2 nucleotidesGFF1119 and GFF1120 are separated by 65 nucleotidesGFF1120 and GFF1121 are separated by 22 nucleotidesGFF1121 and GFF1122 are separated by 4 nucleotidesGFF1122 and GFF1123 overlap by 4 nucleotidesGFF1123 and GFF1124 are separated by 80 nucleotidesGFF1124 and GFF1125 are separated by 195 nucleotides GFF1115 - Putative transmembrane protein, at 431,796 to 432,980 GFF1115 GFF1116 - Membrane-bound lytic murein transglycosylase D, at 432,998 to 434,590 GFF1116 GFF1118 - Hydroxyacylglutathione hydrolase (EC 3.1.2.6), at 434,587 to 435,366 GFF1118 GFF1117 - FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-), at 435,365 to 436,135 GFF1117 GFF1119 - Ribonuclease HI (EC 3.1.26.4), at 436,138 to 436,620 GFF1119 GFF1120 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 436,686 to 437,141 GFF1120 GFF1121 - Molybdopterin molybdenumtransferase (EC 2.10.1.1), at 437,164 to 438,474 GFF1121 GFF1122 - Molybdenum cofactor guanylyltransferase (EC 2.7.7.77), at 438,479 to 439,138 GFF1122 GFF1123 - GTP 3',8-cyclase (EC 4.1.99.22), at 439,135 to 440,292 GFF1123 GFF1124 - no description, at 440,373 to 441,074 GFF1124 GFF1125 - Superoxide dismutase [Mn] (EC 1.15.1.1), at 441,270 to 441,905 GFF1125
Locus Name Description Strand Phenotype
GFF1115 Putative transmembrane protein + insig.
GFF1116 Membrane-bound lytic murein transglycosylase D - insig.
GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) - insig.
GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) + insig.
GFF1119 Ribonuclease HI (EC 3.1.26.4) + strong
GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) + insig.
GFF1121 Molybdopterin molybdenumtransferase (EC 2.10.1.1) - insig.
GFF1122 Molybdenum cofactor guanylyltransferase (EC 2.7.7.77) - insig.
GFF1123 GTP 3',8-cyclase (EC 4.1.99.22) - insig.
GFF1124 no description - insig.
GFF1125 Superoxide dismutase [Mn] (EC 1.15.1.1) + insig.

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