Gene info for GFF111 in Hydrogenophaga sp. GW460-11-11-14-LB1

Annotation: ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD
Type 1: Protein-coding gene
Located on scaffold scaffold4.1, + strand, nucleotides 119,124 to 121,628
See nucleotide sequence around GFF111 or for all of scaffold scaffold4.1

Nearby Genes

500 ntGFF106 and GFF107 are separated by 9 nucleotidesGFF107 and GFF108 are separated by 246 nucleotidesGFF108 and GFF109 are separated by 8 nucleotidesGFF109 and GFF110 are separated by 64 nucleotidesGFF110 and GFF111 are separated by 143 nucleotidesGFF111 and GFF112 are separated by 8 nucleotidesGFF112 and GFF113 are separated by 1 nucleotidesGFF113 and GFF114 overlap by 1 nucleotidesGFF114 and GFF115 are separated by 46 nucleotidesGFF115 and GFF116 are separated by 137 nucleotides GFF106 - FIG00931285: hypothetical protein, at 114,031 to 115,461 GFF106 GFF107 - Transcriptional regulator, LuxR family, at 115,471 to 116,064 GFF107 GFF108 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 116,311 to 117,603 GFF108 GFF109 - FIG004556: membrane metalloprotease, at 117,612 to 118,280 GFF109 GFF110 - Hypothetical YciO protein, TsaC/YrdC paralog, at 118,345 to 118,980 GFF110 GFF111 - ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD, at 119,124 to 121,628 GFF111 GFF112 - Ku domain protein, at 121,637 to 122,470 GFF112 GFF113 - Membrane protein, putative, at 122,472 to 123,383 GFF113 GFF114 - COG0613, Predicted metal-dependent phosphoesterases (PHP family), at 123,383 to 124,240 GFF114 GFF115 - Phosphoenolpyruvate carboxylase (EC 4.1.1.31), at 124,287 to 127,127 GFF115 GFF116 - Porphobilinogen deaminase (EC 2.5.1.61), at 127,265 to 128,221 GFF116
Locus Name Description Strand Phenotype
GFF106 FIG00931285: hypothetical protein + insig.
GFF107 Transcriptional regulator, LuxR family - strong
GFF108 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) - no data
GFF109 FIG004556: membrane metalloprotease - insig.
GFF110 Hypothetical YciO protein, TsaC/YrdC paralog - insig.
GFF111 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD + insig.
GFF112 Ku domain protein + insig.
GFF113 Membrane protein, putative - insig.
GFF114 COG0613, Predicted metal-dependent phosphoesterases (PHP family) - cofit
GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) - strong
GFF116 Porphobilinogen deaminase (EC 2.5.1.61) + no data

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